Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 23% ± 5% | |
GABAergic neuron | 3 studies | 18% ± 3% | |
glutamatergic neuron | 3 studies | 28% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 19% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3391.22 | 2642 / 2642 | 100% | 21.94 | 705 / 705 |
prostate | 100% | 2213.12 | 245 / 245 | 100% | 14.01 | 502 / 502 |
breast | 100% | 1945.28 | 459 / 459 | 100% | 12.19 | 1117 / 1118 |
esophagus | 100% | 1848.64 | 1443 / 1445 | 100% | 8.58 | 183 / 183 |
skin | 100% | 1945.67 | 1805 / 1809 | 100% | 18.13 | 472 / 472 |
uterus | 100% | 1944.51 | 170 / 170 | 99% | 9.33 | 456 / 459 |
ovary | 100% | 2542.71 | 180 / 180 | 99% | 7.47 | 427 / 430 |
thymus | 100% | 2169.75 | 653 / 653 | 99% | 9.69 | 600 / 605 |
intestine | 100% | 1502.53 | 965 / 966 | 99% | 8.82 | 523 / 527 |
stomach | 99% | 1418.62 | 357 / 359 | 100% | 8.84 | 285 / 286 |
lung | 99% | 2048.36 | 572 / 578 | 100% | 11.62 | 1153 / 1155 |
kidney | 100% | 1586.42 | 89 / 89 | 99% | 8.35 | 889 / 901 |
bladder | 100% | 1817.76 | 21 / 21 | 99% | 9.61 | 497 / 504 |
pancreas | 98% | 933.13 | 321 / 328 | 99% | 7.72 | 176 / 178 |
liver | 100% | 1380.95 | 226 / 226 | 96% | 5.87 | 389 / 406 |
adrenal gland | 100% | 2516.81 | 258 / 258 | 94% | 6.92 | 217 / 230 |
adipose | 100% | 1830.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 18.43 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.66 | 29 / 29 |
spleen | 100% | 1442.74 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 9.77 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.89 | 1 / 1 |
blood vessel | 100% | 1829.00 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1118.17 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 1171.51 | 826 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 53% | 583.57 | 494 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006384 | Biological process | transcription initiation at RNA polymerase III promoter |
GO_0006139 | Biological process | nucleobase-containing compound metabolic process |
GO_0051607 | Biological process | defense response to virus |
GO_0006383 | Biological process | transcription by RNA polymerase III |
GO_0045087 | Biological process | innate immune response |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005666 | Cellular component | RNA polymerase III complex |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0003899 | Molecular function | DNA-directed 5'-3' RNA polymerase activity |
Gene name | POLR3H |
Protein name | DNA-directed RNA polymerase subunit RNA polymerase III subunit H DNA-directed RNA polymerase III subunit RPC8 (RNA polymerase III subunit C8) (DNA-directed RNA polymerase III subunit H) (RNA polymerase III subunit 22.9 kDa subunit) (RPC22.9) |
Synonyms | RPC8 KIAA1665 |
Description | FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates . Specific peripheric component of RNA polymerase III (Pol III) which synthesizes small non-coding RNAs including 5S rRNA, snRNAs, tRNAs and miRNAs from at least 500 distinct genomic loci. With CRCP/RPC9 forms a mobile stalk that protrudes from Pol III core and functions primarily in transcription initiation (By similarity). Pol III plays a key role in sensing and limiting infection by intracellular bacteria and DNA viruses. Acts as nuclear and cytosolic DNA sensor involved in innate immune response. Can sense non-self dsDNA that serves as template for transcription into dsRNA. The non-self RNA polymerase III transcripts, such as Epstein-Barr virus-encoded RNAs (EBERs) induce type I interferon and NF-kappa-B through the RIG-I pathway . . FUNCTION: DNA-dependent RNA polymerase which catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. . FUNCTION: DNA-dependent RNA polymerase which catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. . |
Accessions | ENST00000432789.1 ENST00000337566.9 [Q9Y535-2] ENST00000396504.6 [Q9Y535-1] ENST00000407461.5 [Q9Y535-1] ENST00000355209.9 [Q9Y535-1] F8WDV1 Q9Y535 F8WDS5 ENST00000442616.1 ENST00000431534.5 E7ERZ2 |