Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasma cell | 8 studies | 35% ± 13% | |
plasmablast | 7 studies | 35% ± 25% | |
epithelial cell | 3 studies | 26% ± 8% | |
dendritic cell | 3 studies | 22% ± 5% | |
plasmacytoid dendritic cell | 3 studies | 24% ± 6% |
Insufficient scRNA-seq data for expression of PREB at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3094.53 | 1445 / 1445 | 100% | 41.74 | 183 / 183 |
liver | 100% | 6616.52 | 226 / 226 | 100% | 87.88 | 406 / 406 |
ovary | 100% | 4767.02 | 180 / 180 | 100% | 59.71 | 430 / 430 |
pancreas | 100% | 3702.56 | 328 / 328 | 100% | 60.86 | 178 / 178 |
prostate | 100% | 4444.29 | 245 / 245 | 100% | 84.03 | 502 / 502 |
skin | 100% | 2834.06 | 1809 / 1809 | 100% | 76.80 | 472 / 472 |
uterus | 100% | 5700.01 | 170 / 170 | 100% | 78.16 | 459 / 459 |
breast | 100% | 4023.55 | 459 / 459 | 100% | 79.91 | 1117 / 1118 |
thymus | 100% | 3397.25 | 653 / 653 | 100% | 47.97 | 604 / 605 |
lung | 100% | 3521.32 | 578 / 578 | 100% | 74.70 | 1153 / 1155 |
kidney | 100% | 3855.93 | 89 / 89 | 100% | 51.59 | 899 / 901 |
stomach | 100% | 3140.01 | 359 / 359 | 100% | 68.53 | 285 / 286 |
intestine | 100% | 3341.05 | 966 / 966 | 100% | 81.30 | 525 / 527 |
adrenal gland | 100% | 4039.00 | 258 / 258 | 100% | 56.18 | 229 / 230 |
brain | 99% | 2287.79 | 2628 / 2642 | 100% | 62.65 | 705 / 705 |
bladder | 100% | 3364.71 | 21 / 21 | 99% | 76.84 | 501 / 504 |
adipose | 100% | 4174.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 54.70 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 81.86 | 29 / 29 |
muscle | 100% | 7292.87 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 5235.42 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 62.17 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 26.52 | 1 / 1 |
blood vessel | 100% | 2917.06 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3257.50 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 2674.27 | 905 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042953 | Biological process | lipoprotein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0048208 | Biological process | COPII vesicle coating |
GO_0003400 | Biological process | regulation of COPII vesicle coating |
GO_0070971 | Cellular component | endoplasmic reticulum exit site |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0051020 | Molecular function | GTPase binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PREB |
Protein name | Prolactin regulatory element binding Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12) Prometheus B |
Synonyms | hCG_23709 SEC12 |
Description | FUNCTION: Guanine nucleotide exchange factor that specifically activates the small GTPase SAR1B. Mediates the recruitment of SAR1B and other COPII coat components to endoplasmic reticulum membranes and is therefore required for the formation of COPII transport vesicles from the ER. .; FUNCTION: Was first identified based on its probable role in the regulation of pituitary gene transcription. Binds to the prolactin gene (PRL) promoter and seems to activate transcription. . FUNCTION: Guanine nucleotide exchange factor that specifically activates the small GTPase SAR1B. Mediates the recruitment of SAR1B and other COPII coat components to endoplasmic reticulum membranes and is therefore required for the formation of COPII transport vesicles from the ER. .; FUNCTION: Was first identified based on its probable role in the regulation of pituitary gene transcription. Binds to the prolactin gene (PRL) promoter and seems to activate transcription. . FUNCTION: Guanine nucleotide exchange factor that specifically activates the small GTPase SAR1B. Mediates the recruitment of SAR1B and other COPII coat components to endoplasmic reticulum membranes and is therefore required for the formation of COPII transport vesicles from the ER. .; FUNCTION: Was first identified based on its probable role in the regulation of pituitary gene transcription. Binds to the prolactin gene (PRL) promoter and seems to activate transcription. . FUNCTION: Guanine nucleotide exchange factor that specifically activates the small GTPase SAR1B. Mediates the recruitment of SAR1B and other COPII coat components to endoplasmic reticulum membranes and is therefore required for the formation of COPII transport vesicles from the ER. .; FUNCTION: Was first identified based on its probable role in the regulation of pituitary gene transcription. Binds to the prolactin gene (PRL) promoter and seems to activate transcription. . FUNCTION: Guanine nucleotide exchange factor that specifically activates the small GTPase SAR1B. Mediates the recruitment of SAR1B and other COPII coat components to endoplasmic reticulum membranes and is therefore required for the formation of COPII transport vesicles from the ER. .; FUNCTION: Was first identified based on its probable role in the regulation of pituitary gene transcription. Binds to the prolactin gene (PRL) promoter and seems to activate transcription. . |
Accessions | Q05DB2 B5MC98 A0A0F7RPZ8 ENST00000430533.1 H7C2N7 F8WCS5 H7BZX0 ENST00000456259.5 ENST00000444452.5 ENST00000260643.7 H7C0W3 ENST00000441451.1 ENST00000406567.7 Q9HCU5 |