Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 9 studies | 19% ± 4% | |
endothelial cell | 6 studies | 22% ± 7% | |
CD16-negative, CD56-bright natural killer cell, human | 5 studies | 18% ± 2% | |
non-classical monocyte | 4 studies | 26% ± 7% | |
classical monocyte | 4 studies | 24% ± 7% | |
epithelial cell | 4 studies | 35% ± 13% | |
fibroblast | 4 studies | 24% ± 9% | |
regulatory T cell | 4 studies | 17% ± 1% | |
conventional dendritic cell | 3 studies | 32% ± 7% | |
hematopoietic precursor cell | 3 studies | 19% ± 2% | |
B cell | 3 studies | 24% ± 7% | |
ciliated cell | 3 studies | 24% ± 2% | |
effector CD8-positive, alpha-beta T cell | 3 studies | 16% ± 1% | |
macrophage | 3 studies | 21% ± 5% | |
dendritic cell | 3 studies | 33% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1081.35 | 459 / 459 | 100% | 37.10 | 1118 / 1118 |
esophagus | 100% | 966.73 | 1445 / 1445 | 100% | 19.99 | 183 / 183 |
liver | 100% | 588.82 | 226 / 226 | 100% | 19.89 | 406 / 406 |
ovary | 100% | 1015.61 | 180 / 180 | 100% | 28.77 | 430 / 430 |
skin | 100% | 1330.34 | 1809 / 1809 | 100% | 34.55 | 472 / 472 |
stomach | 100% | 724.64 | 359 / 359 | 100% | 24.16 | 286 / 286 |
lung | 100% | 983.81 | 577 / 578 | 100% | 31.14 | 1155 / 1155 |
intestine | 100% | 947.19 | 966 / 966 | 100% | 26.36 | 526 / 527 |
bladder | 100% | 1082.00 | 21 / 21 | 100% | 31.56 | 503 / 504 |
prostate | 100% | 841.50 | 245 / 245 | 100% | 24.53 | 501 / 502 |
pancreas | 100% | 622.98 | 327 / 328 | 100% | 26.18 | 178 / 178 |
thymus | 100% | 951.95 | 653 / 653 | 100% | 36.99 | 603 / 605 |
kidney | 100% | 899.87 | 89 / 89 | 100% | 23.24 | 898 / 901 |
uterus | 100% | 1062.56 | 170 / 170 | 100% | 44.96 | 457 / 459 |
brain | 100% | 680.09 | 2630 / 2642 | 100% | 28.67 | 705 / 705 |
adrenal gland | 100% | 954.47 | 258 / 258 | 99% | 16.42 | 227 / 230 |
adipose | 100% | 1146.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 34.56 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 38.30 | 29 / 29 |
spleen | 100% | 1024.16 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.89 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.15 | 1 / 1 |
blood vessel | 100% | 951.79 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1049.29 | 802 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 1232.09 | 925 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 845.79 | 853 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0006282 | Biological process | regulation of DNA repair |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0042789 | Biological process | mRNA transcription by RNA polymerase II |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_0006367 | Biological process | transcription initiation at RNA polymerase II promoter |
GO_0006352 | Biological process | DNA-templated transcription initiation |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005669 | Cellular component | transcription factor TFIID complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0033276 | Cellular component | transcription factor TFTC complex |
GO_0000124 | Cellular component | SAGA complex |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0017025 | Molecular function | TBP-class protein binding |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0016251 | Molecular function | RNA polymerase II general transcription initiation factor activity |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TAF12 |
Protein name | Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 12 (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15) TATA-box binding protein associated factor 12 |
Synonyms | hCG_1747308 TAF2J TAFII20 TAF15 |
Description | FUNCTION: The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription . TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) . The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 . Component of the TATA-binding protein-free TAF complex (TFTC), the PCAF histone acetylase complex and the STAGA transcription coactivator-HAT complex . . |
Accessions | ENST00000691563.1 ENST00000691050.1 ENST00000693729.1 A0A8I5QKX2 A0A8I5KWX5 ENST00000690492.1 ENST00000693642.1 ENST00000689843.1 [Q16514-1] A0A8I5KPH6 ENST00000471683.6 A0A8I5KYW6 ENST00000690860.1 A0A8I5KP17 A0A8I5KYJ9 A0A8I5KU09 Q16514 A0A8I5KTB6 ENST00000685589.1 ENST00000688108.1 ENST00000495422.2 ENST00000263974.4 [Q16514-1] ENST00000685312.1 [Q16514-1] ENST00000373824.9 [Q16514-1] ENST00000692098.1 [Q16514-1] A0A804HLG9 A0A8I5KXE7 |