Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 19 studies | 29% ± 10% | |
peripheral blood | 16 studies | 33% ± 14% | |
brain | 15 studies | 38% ± 21% | |
eye | 10 studies | 29% ± 13% | |
intestine | 8 studies | 26% ± 12% | |
kidney | 7 studies | 24% ± 6% | |
bone marrow | 5 studies | 27% ± 9% | |
heart | 5 studies | 26% ± 3% | |
lymph node | 5 studies | 24% ± 5% | |
breast | 5 studies | 23% ± 6% | |
liver | 5 studies | 41% ± 17% | |
pancreas | 4 studies | 32% ± 12% | |
placenta | 4 studies | 23% ± 4% | |
uterus | 4 studies | 31% ± 14% | |
prostate | 4 studies | 25% ± 7% | |
adipose | 4 studies | 35% ± 10% | |
skin | 3 studies | 22% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 11227.06 | 459 / 459 | 100% | 31.54 | 1118 / 1118 |
esophagus | 100% | 10958.59 | 1445 / 1445 | 100% | 37.69 | 183 / 183 |
intestine | 100% | 10404.42 | 966 / 966 | 100% | 30.22 | 527 / 527 |
lung | 100% | 12125.23 | 578 / 578 | 100% | 31.78 | 1155 / 1155 |
ovary | 100% | 13171.34 | 180 / 180 | 100% | 24.88 | 430 / 430 |
prostate | 100% | 10967.65 | 245 / 245 | 100% | 24.46 | 502 / 502 |
stomach | 100% | 8333.53 | 359 / 359 | 100% | 29.94 | 286 / 286 |
uterus | 100% | 13062.18 | 170 / 170 | 100% | 30.49 | 459 / 459 |
bladder | 100% | 10584.95 | 21 / 21 | 100% | 31.82 | 503 / 504 |
skin | 100% | 11389.15 | 1809 / 1809 | 100% | 27.56 | 471 / 472 |
pancreas | 100% | 5868.14 | 327 / 328 | 100% | 25.16 | 178 / 178 |
thymus | 100% | 11662.56 | 653 / 653 | 100% | 24.85 | 603 / 605 |
kidney | 100% | 7759.02 | 89 / 89 | 100% | 21.04 | 898 / 901 |
liver | 100% | 4960.79 | 226 / 226 | 99% | 14.06 | 403 / 406 |
brain | 99% | 6419.32 | 2619 / 2642 | 100% | 26.22 | 705 / 705 |
adrenal gland | 100% | 9288.45 | 258 / 258 | 98% | 16.87 | 226 / 230 |
adipose | 100% | 10197.65 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 34.66 | 29 / 29 |
spleen | 100% | 12672.78 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.32 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.10 | 1 / 1 |
blood vessel | 100% | 10617.36 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 6104.14 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 5851.19 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 9003.75 | 908 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 19.53 | 78 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008608 | Biological process | attachment of spindle microtubules to kinetochore |
GO_0000070 | Biological process | mitotic sister chromatid segregation |
GO_0051301 | Biological process | cell division |
GO_0090307 | Biological process | mitotic spindle assembly |
GO_0046785 | Biological process | microtubule polymerization |
GO_0051983 | Biological process | regulation of chromosome segregation |
GO_0050821 | Biological process | protein stabilization |
GO_0007094 | Biological process | mitotic spindle assembly checkpoint signaling |
GO_0001578 | Biological process | microtubule bundle formation |
GO_0005730 | Cellular component | nucleolus |
GO_0005874 | Cellular component | microtubule |
GO_0000776 | Cellular component | kinetochore |
GO_1990047 | Cellular component | spindle matrix |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005819 | Cellular component | spindle |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0008201 | Molecular function | heparin binding |
GO_0008017 | Molecular function | microtubule binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ZNF207 |
Protein name | BUB3-interacting and GLEBS motif-containing protein ZNF207 (BuGZ) (hBuGZ) (Zinc finger protein 207) Zinc finger protein 207 |
Synonyms | BUGZ |
Description | FUNCTION: Kinetochore- and microtubule-binding protein that plays a key role in spindle assembly . ZNF207/BuGZ is mainly composed of disordered low-complexity regions and undergoes phase transition or coacervation to form temperature-dependent liquid droplets. Coacervation promotes microtubule bundling and concentrates tubulin, promoting microtubule polymerization and assembly of spindle and spindle matrix by concentrating its building blocks . Also acts as a regulator of mitotic chromosome alignment by mediating the stability and kinetochore loading of BUB3 . Mechanisms by which BUB3 is protected are unclear: according to a first report, ZNF207/BuGZ may act by blocking ubiquitination and proteasomal degradation of BUB3 . According to another report, the stabilization is independent of the proteasome . . |
Accessions | O43670 ENST00000578918.1 X6R4W8 J3KTL1 ENST00000577908.5 J3KS31 ENST00000394673.6 [O43670-2] J3KRW6 ENST00000582165.1 J3KRB6 ENST00000342555.10 ENST00000321233.10 [O43670-1] J3QRS9 ENST00000581531.5 H0Y3M2 J3QS27 ENST00000394679.9 ENST00000579634.5 ENST00000394670.9 [O43670-4] ENST00000580759.5 |