Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 3 studies | 28% ± 4% | |
glutamatergic neuron | 3 studies | 36% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 26% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 505.31 | 180 / 180 | 100% | 9.04 | 430 / 430 |
breast | 100% | 510.38 | 459 / 459 | 100% | 10.13 | 1117 / 1118 |
esophagus | 100% | 408.72 | 1443 / 1445 | 100% | 9.47 | 183 / 183 |
intestine | 100% | 406.12 | 966 / 966 | 100% | 13.22 | 526 / 527 |
bladder | 100% | 493.05 | 21 / 21 | 100% | 10.67 | 503 / 504 |
uterus | 100% | 550.05 | 170 / 170 | 100% | 9.96 | 458 / 459 |
brain | 100% | 409.64 | 2634 / 2642 | 100% | 13.08 | 705 / 705 |
prostate | 100% | 442.65 | 245 / 245 | 100% | 7.82 | 500 / 502 |
stomach | 100% | 373.37 | 358 / 359 | 100% | 12.11 | 285 / 286 |
thymus | 100% | 415.11 | 653 / 653 | 99% | 7.96 | 600 / 605 |
skin | 100% | 619.96 | 1809 / 1809 | 99% | 13.50 | 467 / 472 |
pancreas | 99% | 244.16 | 324 / 328 | 99% | 7.18 | 177 / 178 |
lung | 98% | 329.15 | 567 / 578 | 100% | 8.68 | 1155 / 1155 |
kidney | 100% | 320.13 | 89 / 89 | 98% | 6.77 | 879 / 901 |
adrenal gland | 100% | 449.24 | 258 / 258 | 95% | 6.54 | 219 / 230 |
liver | 100% | 252.04 | 226 / 226 | 93% | 4.57 | 376 / 406 |
adipose | 100% | 507.76 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 438.35 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.01 | 29 / 29 |
muscle | 100% | 456.44 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 377.12 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.26 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.33 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 95% | 7.30 | 76 / 80 |
heart | 93% | 209.47 | 803 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 52% | 258.29 | 480 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006396 | Biological process | RNA processing |
GO_0000492 | Biological process | box C/D snoRNP assembly |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005730 | Cellular component | nucleolus |
GO_0005726 | Cellular component | perichromatin fibrils |
GO_0008023 | Cellular component | transcription elongation factor complex |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0001650 | Cellular component | fibrillar center |
GO_0016363 | Cellular component | nuclear matrix |
GO_0070761 | Cellular component | pre-snoRNP complex |
GO_0048786 | Cellular component | presynaptic active zone |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0030515 | Molecular function | snoRNA binding |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0051117 | Molecular function | ATPase binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NUFIP1 |
Protein name | FMR1-interacting protein NUFIP1 (Nuclear FMR1-interacting protein 1) (Nuclear FMRP-interacting protein 1) |
Synonyms | |
Description | FUNCTION: Binds RNA. . |
Accessions | ENST00000379161.5 Q9UHK0 |