Insufficient scRNA-seq data for expression of FOXD1 at single-cell level.
Insufficient scRNA-seq data for expression of FOXD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 81% | 125.85 | 1168 / 1445 | 85% | 8.81 | 156 / 183 |
skin | 85% | 332.85 | 1534 / 1809 | 60% | 3.29 | 282 / 472 |
brain | 65% | 42.99 | 1722 / 2642 | 77% | 5.21 | 540 / 705 |
kidney | 97% | 105.76 | 86 / 89 | 27% | 1.04 | 246 / 901 |
adrenal gland | 84% | 69.81 | 218 / 258 | 16% | 0.60 | 37 / 230 |
tonsil | 0% | 0 | 0 / 0 | 96% | 4.85 | 43 / 45 |
uterus | 16% | 7.70 | 27 / 170 | 71% | 5.57 | 326 / 459 |
bladder | 33% | 15.00 | 7 / 21 | 39% | 2.02 | 198 / 504 |
prostate | 11% | 7.25 | 27 / 245 | 54% | 2.26 | 271 / 502 |
lung | 16% | 6.65 | 95 / 578 | 48% | 2.54 | 559 / 1155 |
blood vessel | 61% | 76.75 | 812 / 1335 | 0% | 0 | 0 / 0 |
intestine | 13% | 12.74 | 121 / 966 | 46% | 2.88 | 242 / 527 |
breast | 33% | 27.92 | 152 / 459 | 24% | 0.97 | 267 / 1118 |
stomach | 11% | 5.24 | 39 / 359 | 43% | 3.32 | 124 / 286 |
pancreas | 0% | 0 | 0 / 328 | 48% | 1.50 | 86 / 178 |
thymus | 29% | 14.25 | 189 / 653 | 2% | 0.08 | 11 / 605 |
adipose | 27% | 30.88 | 331 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 24% | 0.64 | 7 / 29 |
ovary | 3% | 1.42 | 5 / 180 | 20% | 2.43 | 84 / 430 |
eye | 0% | 0 | 0 / 0 | 21% | 0.58 | 17 / 80 |
muscle | 13% | 7.60 | 105 / 803 | 0% | 0 | 0 / 0 |
spleen | 5% | 1.80 | 12 / 241 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 3% | 0.16 | 14 / 406 |
peripheral blood | 2% | 1.12 | 16 / 929 | 0% | 0 | 0 / 0 |
heart | 0% | 0.19 | 4 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0072267 | Biological process | metanephric capsule specification |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0072076 | Biological process | nephrogenic mesenchyme development |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0060070 | Biological process | canonical Wnt signaling pathway |
GO_0060678 | Biological process | dichotomous subdivision of terminal units involved in ureteric bud branching |
GO_0072210 | Biological process | metanephric nephron development |
GO_0032275 | Biological process | luteinizing hormone secretion |
GO_0030154 | Biological process | cell differentiation |
GO_0030513 | Biological process | positive regulation of BMP signaling pathway |
GO_0009653 | Biological process | anatomical structure morphogenesis |
GO_0072213 | Biological process | metanephric capsule development |
GO_0090184 | Biological process | positive regulation of kidney development |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0007411 | Biological process | axon guidance |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0008301 | Molecular function | DNA binding, bending |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
Gene name | FOXD1 |
Protein name | Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead-related transcription factor 4) (FREAC-4) |
Synonyms | FREAC4 FKHL8 |
Description | FUNCTION: Transcription factor involved in regulation of gene expression in a variety of processes, including formation of positional identity in the developing retina, regionalization of the optic chiasm, morphogenesis of the kidney, and neuralization of ectodermal cells (By similarity). Involved in transcriptional activation of PGF and C3 genes . . |
Accessions | ENST00000615637.3 Q16676 |