Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 4 studies | 20% ± 5% | |
epithelial cell | 4 studies | 28% ± 5% | |
GABAergic neuron | 4 studies | 25% ± 8% | |
glutamatergic neuron | 4 studies | 32% ± 10% | |
macrophage | 4 studies | 18% ± 1% | |
ciliated cell | 3 studies | 19% ± 0% | |
goblet cell | 3 studies | 25% ± 11% | |
transit amplifying cell | 3 studies | 22% ± 7% | |
astrocyte | 3 studies | 17% ± 2% | |
oligodendrocyte | 3 studies | 17% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 27% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2700.24 | 21 / 21 | 100% | 33.49 | 504 / 504 |
breast | 100% | 2799.75 | 459 / 459 | 100% | 36.62 | 1118 / 1118 |
esophagus | 100% | 2869.22 | 1445 / 1445 | 100% | 38.49 | 183 / 183 |
intestine | 100% | 2766.15 | 966 / 966 | 100% | 30.49 | 527 / 527 |
lung | 100% | 2581.22 | 578 / 578 | 100% | 34.85 | 1155 / 1155 |
ovary | 100% | 2665.62 | 180 / 180 | 100% | 40.55 | 430 / 430 |
pancreas | 100% | 1918.45 | 328 / 328 | 100% | 23.24 | 178 / 178 |
prostate | 100% | 2999.62 | 245 / 245 | 100% | 25.89 | 502 / 502 |
skin | 100% | 3757.45 | 1809 / 1809 | 100% | 34.69 | 472 / 472 |
stomach | 100% | 2266.22 | 359 / 359 | 100% | 30.12 | 286 / 286 |
uterus | 100% | 2778.36 | 170 / 170 | 100% | 34.72 | 459 / 459 |
thymus | 100% | 3868.65 | 653 / 653 | 100% | 31.70 | 604 / 605 |
kidney | 100% | 2333.83 | 89 / 89 | 99% | 23.30 | 896 / 901 |
adrenal gland | 100% | 2881.05 | 258 / 258 | 98% | 15.78 | 225 / 230 |
brain | 98% | 1526.87 | 2584 / 2642 | 100% | 28.50 | 705 / 705 |
liver | 100% | 1342.76 | 226 / 226 | 95% | 13.50 | 384 / 406 |
adipose | 100% | 2386.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 33.72 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.27 | 29 / 29 |
spleen | 100% | 3603.02 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.50 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.84 | 1 / 1 |
blood vessel | 100% | 2272.70 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2007.65 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1272.08 | 842 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 2037.76 | 853 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042797 | Biological process | tRNA transcription by RNA polymerase III |
GO_0042791 | Biological process | 5S class rRNA transcription by RNA polymerase III |
GO_0006383 | Biological process | transcription by RNA polymerase III |
GO_0000127 | Cellular component | transcription factor TFIIIC complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0003677 | Molecular function | DNA binding |
GO_0000995 | Molecular function | RNA polymerase III general transcription initiation factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | GTF3C2 |
Protein name | Uncharacterized protein GTF3C2 General transcription factor IIIC subunit 2 General transcription factor 3C polypeptide 2 (TF3C-beta) (Transcription factor IIIC 110 kDa subunit) (TFIIIC 110 kDa subunit) (TFIIIC110) (Transcription factor IIIC subunit beta) |
Synonyms | KIAA0011 |
Description | FUNCTION: Required for RNA polymerase III-mediated transcription. Component of TFIIIC that initiates transcription complex assembly on tRNA and is required for transcription of 5S rRNA and other stable nuclear and cytoplasmic RNAs. May play a direct role in stabilizing interactions of TFIIIC2 with TFIIIC1. |
Accessions | ENST00000264720.8 [Q8WUA4-1] ENST00000457098.5 H0Y4Q6 ENST00000359541.6 [Q8WUA4-1] H7C1A9 H7C318 Q53QN0 ENST00000423998.1 Q53SY8 ENST00000415683.2 ENST00000454704.5 H7C3X9 Q8WUA4 C9JQ12 ENST00000457748.1 ENST00000431028.5 C9JNH7 |