Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 23% ± 6% | |
natural killer cell | 8 studies | 20% ± 5% | |
epithelial cell | 7 studies | 30% ± 11% | |
classical monocyte | 6 studies | 25% ± 11% | |
CD16-negative, CD56-bright natural killer cell, human | 5 studies | 19% ± 3% | |
CD16-positive, CD56-dim natural killer cell, human | 5 studies | 22% ± 6% | |
retinal cone cell | 5 studies | 24% ± 6% | |
ciliated cell | 5 studies | 24% ± 7% | |
macrophage | 5 studies | 19% ± 2% | |
CD8-positive, alpha-beta memory T cell | 4 studies | 17% ± 2% | |
non-classical monocyte | 4 studies | 29% ± 12% | |
retinal rod cell | 4 studies | 19% ± 1% | |
cardiac muscle cell | 4 studies | 19% ± 3% | |
basal cell | 4 studies | 25% ± 9% | |
astrocyte | 4 studies | 22% ± 7% | |
goblet cell | 4 studies | 25% ± 10% | |
B cell | 3 studies | 18% ± 1% | |
mature NK T cell | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 28% ± 6% | |
glutamatergic neuron | 3 studies | 37% ± 9% | |
monocyte | 3 studies | 18% ± 1% | |
endothelial cell of lymphatic vessel | 3 studies | 21% ± 1% | |
gamma-delta T cell | 3 studies | 24% ± 10% | |
transit amplifying cell | 3 studies | 28% ± 15% | |
abnormal cell | 3 studies | 20% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4996.89 | 1445 / 1445 | 100% | 38.04 | 183 / 183 |
intestine | 100% | 4123.26 | 966 / 966 | 100% | 27.81 | 527 / 527 |
stomach | 100% | 3053.79 | 359 / 359 | 100% | 28.67 | 286 / 286 |
uterus | 100% | 3922.97 | 170 / 170 | 100% | 29.28 | 459 / 459 |
breast | 100% | 4183.15 | 459 / 459 | 100% | 41.72 | 1116 / 1118 |
prostate | 100% | 3767.58 | 245 / 245 | 100% | 26.13 | 500 / 502 |
skin | 100% | 4714.21 | 1809 / 1809 | 100% | 32.74 | 470 / 472 |
lung | 100% | 4243.19 | 578 / 578 | 100% | 30.55 | 1150 / 1155 |
ovary | 100% | 3831.11 | 180 / 180 | 100% | 24.90 | 428 / 430 |
thymus | 100% | 3810.40 | 653 / 653 | 99% | 23.11 | 600 / 605 |
bladder | 100% | 3502.33 | 21 / 21 | 99% | 22.66 | 498 / 504 |
pancreas | 100% | 2138.24 | 327 / 328 | 99% | 24.88 | 176 / 178 |
kidney | 100% | 2700.09 | 89 / 89 | 98% | 19.03 | 880 / 901 |
brain | 96% | 2172.03 | 2546 / 2642 | 99% | 17.14 | 701 / 705 |
adrenal gland | 100% | 3572.74 | 258 / 258 | 93% | 14.47 | 214 / 230 |
liver | 100% | 2211.01 | 226 / 226 | 92% | 13.36 | 375 / 406 |
adipose | 100% | 4301.74 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 22.98 | 29 / 29 |
muscle | 100% | 3894.61 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6246.41 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.07 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.98 | 1 / 1 |
blood vessel | 100% | 3152.05 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3271.15 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 6249.29 | 919 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 19.19 | 79 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006325 | Biological process | chromatin organization |
GO_0006334 | Biological process | nucleosome assembly |
GO_0005634 | Cellular component | nucleus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016604 | Cellular component | nuclear body |
GO_0034451 | Cellular component | centriolar satellite |
GO_0016605 | Cellular component | PML body |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | UBN1 |
Protein name | Ubinuclein-1 (HIRA-binding protein) (Protein VT4) (Ubiquitously expressed nuclear protein) Ubinuclein 1 |
Synonyms | |
Description | FUNCTION: Acts as a novel regulator of senescence. Involved in the formation of senescence-associated heterochromatin foci (SAHF), which represses expression of proliferation-promoting genes. Binds to proliferation-promoting genes. May be required for replication-independent chromatin assembly. . |
Accessions | ENST00000589191.1 ENST00000587027.1 ENST00000262376.11 [Q9NPG3-1] K7EQR1 K7ESM4 ENST00000592120.5 K7EJT1 ENST00000586716.1 K7ER78 Q9NPG3 ENST00000590769.5 [Q9NPG3-2] ENST00000396658.8 [Q9NPG3-1] |