Insufficient scRNA-seq data for expression of RTEL1 at single-cell level.
Insufficient scRNA-seq data for expression of RTEL1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2786.52 | 1445 / 1445 | 13% | 0.18 | 24 / 183 |
stomach | 100% | 2515.35 | 359 / 359 | 11% | 0.14 | 32 / 286 |
adrenal gland | 100% | 3318.81 | 258 / 258 | 7% | 0.10 | 17 / 230 |
intestine | 100% | 3628.33 | 966 / 966 | 6% | 0.08 | 32 / 527 |
ovary | 100% | 3284.15 | 180 / 180 | 6% | 0.08 | 25 / 430 |
skin | 100% | 2243.48 | 1808 / 1809 | 4% | 0.06 | 20 / 472 |
kidney | 100% | 2630.64 | 89 / 89 | 4% | 0.05 | 35 / 901 |
lung | 100% | 3403.42 | 577 / 578 | 4% | 0.05 | 43 / 1155 |
breast | 100% | 2964.12 | 459 / 459 | 3% | 0.05 | 37 / 1118 |
bladder | 100% | 3331.76 | 21 / 21 | 3% | 0.05 | 16 / 504 |
uterus | 100% | 4706.17 | 170 / 170 | 3% | 0.04 | 13 / 459 |
pancreas | 100% | 1757.72 | 328 / 328 | 2% | 0.03 | 4 / 178 |
thymus | 100% | 4686.49 | 653 / 653 | 0% | 0.00 | 2 / 605 |
prostate | 100% | 3944.18 | 245 / 245 | 0% | 0.00 | 1 / 502 |
liver | 100% | 1618.48 | 226 / 226 | 0% | 0 | 0 / 406 |
spleen | 100% | 4085.89 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3667.80 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2676.53 | 1203 / 1204 | 0% | 0 | 0 / 0 |
brain | 95% | 2891.15 | 2507 / 2642 | 4% | 0.06 | 28 / 705 |
muscle | 98% | 1280.30 | 788 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1381.55 | 831 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 1128.08 | 752 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032508 | Biological process | DNA duplex unwinding |
GO_0010569 | Biological process | regulation of double-strand break repair via homologous recombination |
GO_1902990 | Biological process | mitotic telomere maintenance via semi-conservative replication |
GO_0006281 | Biological process | DNA repair |
GO_1904506 | Biological process | negative regulation of telomere maintenance in response to DNA damage |
GO_1904355 | Biological process | positive regulation of telomere capping |
GO_0090657 | Biological process | telomeric loop disassembly |
GO_0000732 | Biological process | DNA strand displacement |
GO_0031297 | Biological process | replication fork processing |
GO_0032206 | Biological process | positive regulation of telomere maintenance |
GO_1904430 | Biological process | negative regulation of t-circle formation |
GO_0000723 | Biological process | telomere maintenance |
GO_0043247 | Biological process | telomere maintenance in response to DNA damage |
GO_1904358 | Biological process | positive regulation of telomere maintenance via telomere lengthening |
GO_1904535 | Biological process | positive regulation of telomeric loop disassembly |
GO_0045910 | Biological process | negative regulation of DNA recombination |
GO_0016607 | Cellular component | nuclear speck |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000781 | Cellular component | chromosome, telomeric region |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0070182 | Molecular function | DNA polymerase binding |
GO_0003678 | Molecular function | DNA helicase activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0051539 | Molecular function | 4 iron, 4 sulfur cluster binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | RTEL1 |
Protein name | Regulator of telomere elongation helicase 1 (EC 3.6.4.12) Regulator of telomere elongation helicase 1 (EC 3.6.4.12) (Novel helicase-like) Regulator of telomere elongation helicase 1 |
Synonyms | NHL KIAA1088 C20orf41 |
Description | FUNCTION: ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by counteracting telomeric G4-DNA structures, which together ensure the dynamics and stability of the telomere. . FUNCTION: ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by counteracting telomeric G4-DNA structures, which together ensure the dynamics and stability of the telomere. . |
Accessions | ENST00000684971.1 ENST00000482936.6 [Q9NZ71-8] A0A2R8YD56 ENST00000692658.1 ENST00000508582.7 [Q9NZ71-7] ENST00000646389.1 R4IXY3 X6R5I7 ENST00000360203.11 [Q9NZ71-6] ENST00000469728.5 A0A0C4DGC7 ENST00000496816.5 Q9NZ71 ENST00000318100.9 [Q9NZ71-9] A0A2R8Y7H5 A0A8V8TLQ6 A0A8V8TLB5 ENST00000356810.5 ENST00000687123.1 ENST00000370018.7 [Q9NZ71-1] |