Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 2045.73 | 459 / 459 | 100% | 13.10 | 1118 / 1118 |
esophagus | 100% | 1714.03 | 1445 / 1445 | 100% | 10.30 | 183 / 183 |
lung | 100% | 1522.41 | 578 / 578 | 100% | 9.87 | 1155 / 1155 |
prostate | 100% | 1692.15 | 245 / 245 | 100% | 10.01 | 501 / 502 |
ovary | 100% | 2110.77 | 180 / 180 | 100% | 7.80 | 429 / 430 |
brain | 100% | 1458.33 | 2632 / 2642 | 100% | 9.80 | 705 / 705 |
uterus | 100% | 2199.58 | 170 / 170 | 100% | 10.54 | 457 / 459 |
thymus | 100% | 1863.66 | 653 / 653 | 99% | 9.64 | 600 / 605 |
bladder | 100% | 1938.14 | 21 / 21 | 99% | 9.45 | 498 / 504 |
adrenal gland | 100% | 1820.60 | 258 / 258 | 99% | 8.96 | 227 / 230 |
kidney | 100% | 1381.01 | 89 / 89 | 98% | 8.35 | 884 / 901 |
intestine | 100% | 1721.71 | 966 / 966 | 98% | 9.17 | 517 / 527 |
pancreas | 100% | 900.75 | 327 / 328 | 98% | 7.22 | 175 / 178 |
stomach | 100% | 1387.83 | 359 / 359 | 98% | 9.47 | 280 / 286 |
liver | 100% | 992.96 | 226 / 226 | 95% | 5.07 | 384 / 406 |
skin | 100% | 2005.03 | 1809 / 1809 | 93% | 10.89 | 441 / 472 |
adipose | 100% | 1899.24 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1716.73 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.77 | 29 / 29 |
muscle | 100% | 2254.98 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1559.94 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.12 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.07 | 1 / 1 |
heart | 98% | 1040.39 | 843 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 4.42 | 58 / 80 |
peripheral blood | 48% | 828.22 | 443 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006364 | Biological process | rRNA processing |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005694 | Cellular component | chromosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0032040 | Cellular component | small-subunit processome |
GO_0045171 | Cellular component | intercellular bridge |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | KRR1 |
Protein name | KRR1 small subunit processome component homolog (HIV-1 Rev-binding protein 2) (KRR-R motif-containing protein 1) (Rev-interacting protein 1) (Rip-1) |
Synonyms | HRB2 |
Description | FUNCTION: Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome. . |
Accessions | ENST00000438169.6 [Q13601-2] Q13601 ENST00000229214.9 [Q13601-1] |