RAVER2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	10 studies	35% ± 16%	Explore
glutamatergic neuron	5 studies	46% ± 19%	Explore
oligodendrocyte precursor cell	5 studies	33% ± 9%	Explore
endothelial cell	4 studies	26% ± 9%	Explore
epithelial cell	4 studies	23% ± 3%	Explore
GABAergic neuron	3 studies	52% ± 9%	Explore
ependymal cell	3 studies	32% ± 14%	Explore
goblet cell	3 studies	19% ± 1%	Explore
interneuron	3 studies	50% ± 21%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	33% ± 13%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	2096.50	245 / 245	100%	14.69	502 / 502
intestine	100%	2752.42	966 / 966	99%	21.57	523 / 527
brain	99%	1776.22	2621 / 2642	100%	19.17	704 / 705
stomach	100%	1284.69	359 / 359	99%	22.94	283 / 286
esophagus	100%	1851.77	1445 / 1445	99%	21.44	181 / 183
pancreas	100%	824.38	327 / 328	98%	12.34	175 / 178
kidney	100%	1074.91	89 / 89	98%	13.86	879 / 901
uterus	100%	1508.24	170 / 170	97%	15.32	443 / 459
lung	100%	1669.78	577 / 578	95%	12.38	1094 / 1155
thymus	100%	1363.36	652 / 653	94%	8.88	571 / 605
ovary	100%	1203.31	180 / 180	94%	9.72	405 / 430
breast	100%	1248.50	459 / 459	93%	12.76	1036 / 1118
adrenal gland	100%	1747.84	258 / 258	92%	7.67	212 / 230
skin	100%	1103.50	1800 / 1809	89%	12.20	420 / 472
bladder	100%	1470.43	21 / 21	86%	11.93	431 / 504
muscle	100%	1538.43	803 / 803	0%	0	0 / 0
spleen	100%	898.58	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	13.21	45 / 45
ureter	0%	0	0 / 0	100%	6.13	1 / 1
adipose	100%	1079.83	1199 / 1204	0%	0	0 / 0
blood vessel	99%	1920.38	1325 / 1335	0%	0	0 / 0
heart	98%	1592.26	843 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	76%	5.05	61 / 80
liver	5%	21.95	12 / 226	41%	4.12	168 / 406
lymph node	0%	0	0 / 0	38%	2.26	11 / 29
peripheral blood	5%	32.78	45 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0