SRP9 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	38 studies	37% ± 18%	Explore
natural killer cell	37 studies	35% ± 12%	Explore
fibroblast	36 studies	38% ± 18%	Explore
B cell	32 studies	34% ± 15%	Explore
CD8-positive, alpha-beta T cell	32 studies	37% ± 16%	Explore
CD4-positive, alpha-beta T cell	28 studies	39% ± 16%	Explore
T cell	27 studies	38% ± 17%	Explore
conventional dendritic cell	25 studies	33% ± 15%	Explore
regulatory T cell	25 studies	38% ± 13%	Explore
smooth muscle cell	24 studies	42% ± 17%	Explore
macrophage	24 studies	27% ± 10%	Explore
pericyte	23 studies	43% ± 18%	Explore
epithelial cell	22 studies	47% ± 23%	Explore
non-classical monocyte	21 studies	29% ± 13%	Explore
classical monocyte	20 studies	26% ± 11%	Explore
basal cell	19 studies	41% ± 21%	Explore
endothelial cell of lymphatic vessel	18 studies	42% ± 16%	Explore
mature NK T cell	18 studies	33% ± 10%	Explore
memory B cell	18 studies	29% ± 8%	Explore
ciliated cell	17 studies	52% ± 20%	Explore
naive B cell	17 studies	29% ± 7%	Explore
gamma-delta T cell	17 studies	36% ± 15%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	31% ± 10%	Explore
connective tissue cell	16 studies	49% ± 20%	Explore
mast cell	14 studies	28% ± 14%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	32% ± 11%	Explore
plasma cell	14 studies	35% ± 13%	Explore
plasmacytoid dendritic cell	14 studies	34% ± 12%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	38% ± 10%	Explore
monocyte	14 studies	30% ± 11%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	38% ± 11%	Explore
myofibroblast cell	13 studies	49% ± 20%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	34% ± 15%	Explore
secretory cell	12 studies	41% ± 15%	Explore
capillary endothelial cell	12 studies	39% ± 15%	Explore
vein endothelial cell	12 studies	37% ± 16%	Explore
mucosal invariant T cell	12 studies	33% ± 9%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	36% ± 15%	Explore
endothelial cell of artery	11 studies	44% ± 15%	Explore
astrocyte	11 studies	34% ± 19%	Explore
dendritic cell	11 studies	40% ± 25%	Explore
endothelial cell of vascular tree	11 studies	35% ± 8%	Explore
plasmablast	10 studies	40% ± 22%	Explore
goblet cell	10 studies	40% ± 17%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	32% ± 11%	Explore
progenitor cell	9 studies	55% ± 12%	Explore
abnormal cell	9 studies	55% ± 20%	Explore
myeloid cell	9 studies	28% ± 12%	Explore
type I pneumocyte	8 studies	29% ± 16%	Explore
neuron	8 studies	53% ± 24%	Explore
mesothelial cell	8 studies	55% ± 25%	Explore
T follicular helper cell	8 studies	39% ± 9%	Explore
type II pneumocyte	7 studies	37% ± 20%	Explore
innate lymphoid cell	7 studies	30% ± 6%	Explore
club cell	7 studies	44% ± 8%	Explore
epithelial cell of proximal tubule	7 studies	49% ± 14%	Explore
precursor B cell	7 studies	48% ± 11%	Explore
ionocyte	6 studies	50% ± 20%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	46% ± 15%	Explore
leukocyte	6 studies	32% ± 11%	Explore
kidney loop of Henle epithelial cell	6 studies	47% ± 11%	Explore
renal alpha-intercalated cell	6 studies	67% ± 5%	Explore
enterocyte	6 studies	29% ± 11%	Explore
hematopoietic stem cell	6 studies	44% ± 11%	Explore
erythrocyte	6 studies	37% ± 23%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	39% ± 15%	Explore
GABAergic neuron	6 studies	30% ± 6%	Explore
alveolar macrophage	5 studies	20% ± 4%	Explore
CD4-positive helper T cell	5 studies	22% ± 5%	Explore
hematopoietic precursor cell	5 studies	53% ± 26%	Explore
exhausted T cell	5 studies	47% ± 11%	Explore
respiratory goblet cell	5 studies	40% ± 19%	Explore
mononuclear phagocyte	5 studies	33% ± 19%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	64% ± 19%	Explore
intestinal crypt stem cell	5 studies	35% ± 13%	Explore
transit amplifying cell	5 studies	42% ± 16%	Explore
retinal rod cell	5 studies	33% ± 19%	Explore
pro-B cell	5 studies	53% ± 9%	Explore
neuroendocrine cell	5 studies	68% ± 16%	Explore
oligodendrocyte	5 studies	24% ± 7%	Explore
oligodendrocyte precursor cell	5 studies	37% ± 18%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	28% ± 13%	Explore
platelet	4 studies	18% ± 2%	Explore
pancreatic A cell	4 studies	75% ± 14%	Explore
type B pancreatic cell	4 studies	71% ± 21%	Explore
enteroendocrine cell	4 studies	65% ± 19%	Explore
microglial cell	4 studies	31% ± 10%	Explore
retinal ganglion cell	4 studies	60% ± 29%	Explore
erythroblast	4 studies	51% ± 23%	Explore
lymphocyte	4 studies	40% ± 16%	Explore
megakaryocyte	4 studies	28% ± 7%	Explore
brush cell	4 studies	39% ± 23%	Explore
immature B cell	4 studies	49% ± 20%	Explore
amacrine cell	4 studies	49% ± 23%	Explore
retina horizontal cell	4 studies	38% ± 21%	Explore
adventitial cell	4 studies	27% ± 10%	Explore
Mueller cell	4 studies	56% ± 23%	Explore
germinal center B cell	4 studies	45% ± 14%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	52% ± 8%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	58% ± 9%	Explore
glutamatergic neuron	4 studies	40% ± 6%	Explore
hepatocyte	4 studies	41% ± 32%	Explore
T-helper 17 cell	4 studies	45% ± 23%	Explore
interneuron	4 studies	32% ± 13%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	35% ± 8%	Explore
double negative thymocyte	4 studies	47% ± 21%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	43% ± 18%	Explore
deuterosomal cell	3 studies	45% ± 5%	Explore
duct epithelial cell	3 studies	34% ± 7%	Explore
precursor cell	3 studies	59% ± 12%	Explore
pancreatic D cell	3 studies	73% ± 21%	Explore
glomerular endothelial cell	3 studies	33% ± 7%	Explore
podocyte	3 studies	65% ± 12%	Explore
neural crest cell	3 studies	66% ± 19%	Explore
retinal bipolar neuron	3 studies	42% ± 19%	Explore
renal principal cell	3 studies	50% ± 7%	Explore
retinal cone cell	3 studies	71% ± 19%	Explore
retinal pigment epithelial cell	3 studies	38% ± 27%	Explore
serous secreting cell	3 studies	45% ± 7%	Explore
intraepithelial lymphocyte	3 studies	40% ± 16%	Explore
acinar cell	3 studies	55% ± 25%	Explore
muscle cell	3 studies	37% ± 19%	Explore
intermediate monocyte	3 studies	40% ± 19%	Explore
myoepithelial cell	3 studies	41% ± 11%	Explore
luminal cell of prostate epithelium	3 studies	40% ± 10%	Explore
pancreatic ductal cell	3 studies	77% ± 13%	Explore
granulocyte	3 studies	35% ± 9%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	53% ± 29%	Explore
glial cell	3 studies	45% ± 30%	Explore
group 3 innate lymphoid cell	3 studies	40% ± 15%	Explore
melanocyte	3 studies	23% ± 4%	Explore
keratinocyte	3 studies	38% ± 7%	Explore
T-helper 1 cell	3 studies	41% ± 9%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	35% ± 11%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	19 studies	33% ± 12%	Explore
lung	17 studies	41% ± 20%	Explore
intestine	10 studies	38% ± 22%	Explore
brain	10 studies	29% ± 8%	Explore
kidney	9 studies	40% ± 11%	Explore
eye	9 studies	37% ± 17%	Explore
liver	6 studies	36% ± 24%	Explore
pancreas	5 studies	59% ± 29%	Explore
bone marrow	5 studies	27% ± 6%	Explore
lymph node	5 studies	43% ± 14%	Explore
placenta	4 studies	27% ± 13%	Explore
uterus	4 studies	46% ± 17%	Explore
breast	4 studies	36% ± 8%	Explore
adrenal gland	3 studies	37% ± 11%	Explore
prostate	3 studies	32% ± 5%	Explore
skin	3 studies	35% ± 4%	Explore
thymus	3 studies	63% ± 24%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	8254.85	2642 / 2642	100%	313.74	705 / 705
breast	100%	5658.86	459 / 459	100%	406.13	1118 / 1118
esophagus	100%	5307.93	1445 / 1445	100%	250.03	183 / 183
ovary	100%	5148.43	180 / 180	100%	317.55	430 / 430
uterus	100%	4806.38	170 / 170	100%	238.86	459 / 459
lung	100%	5150.21	576 / 578	100%	251.22	1155 / 1155
stomach	100%	4345.32	359 / 359	100%	207.77	285 / 286
prostate	100%	5670.29	245 / 245	100%	209.36	500 / 502
liver	100%	5135.59	226 / 226	100%	194.96	404 / 406
thymus	100%	5126.19	653 / 653	99%	196.71	600 / 605
adrenal gland	100%	9031.83	258 / 258	99%	194.22	228 / 230
bladder	100%	5648.38	21 / 21	99%	210.84	499 / 504
kidney	100%	6101.72	89 / 89	99%	149.57	891 / 901
pancreas	99%	2986.51	326 / 328	99%	169.10	176 / 178
intestine	100%	5582.87	966 / 966	98%	206.82	517 / 527
skin	100%	5329.21	1807 / 1809	92%	157.07	436 / 472
lymph node	0%	0	0 / 0	100%	151.19	29 / 29
muscle	100%	5642.96	803 / 803	0%	0	0 / 0
spleen	100%	5121.57	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	183.91	45 / 45
ureter	0%	0	0 / 0	100%	117.53	1 / 1
blood vessel	100%	5477.45	1334 / 1335	0%	0	0 / 0
adipose	100%	5175.34	1203 / 1204	0%	0	0 / 0
heart	98%	4153.97	844 / 861	0%	0	0 / 0
peripheral blood	63%	2897.81	581 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	63%	57.50	50 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

IV. Literature review

[source]

Gene name	SRP9
Protein name	Signal recognition particle 9 Signal recognition particle 9 kDa protein (SRP9) Signal recognition particle 9 kDa protein
Synonyms	DKFZp564M2223
Description	FUNCTION: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER) (By similarity). SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP . The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity). .
Accessions	Q6P2S0 ENST00000650651.1 Q659G3 ENST00000304786.12 [P49458-1] ENST00000366839.8 [P49458-2] ENST00000626563.2 ENST00000651761.1 ENST00000619790.4 [P49458-2] ENST00000651465.1 [P49458-2] ENST00000366838.1 P49458 E9PE20

GO_0006614	Biological process	SRP-dependent cotranslational protein targeting to membrane
GO_0045900	Biological process	negative regulation of translational elongation
GO_0005785	Cellular component	signal recognition particle receptor complex
GO_0005786	Cellular component	signal recognition particle, endoplasmic reticulum targeting
GO_0005829	Cellular component	cytosol
GO_0005047	Molecular function	signal recognition particle binding
GO_0008312	Molecular function	7S RNA binding
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

SRP9 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review