Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 32 studies | 33% ± 11% | |
capillary endothelial cell | 10 studies | 27% ± 11% | |
type I pneumocyte | 9 studies | 35% ± 15% | |
fibroblast | 9 studies | 25% ± 7% | |
pericyte | 7 studies | 25% ± 6% | |
vein endothelial cell | 7 studies | 32% ± 20% | |
endothelial cell of lymphatic vessel | 7 studies | 33% ± 13% | |
endothelial cell of vascular tree | 6 studies | 31% ± 18% | |
type II pneumocyte | 6 studies | 29% ± 8% | |
epithelial cell | 5 studies | 24% ± 7% | |
adipocyte | 5 studies | 19% ± 4% | |
endothelial cell of artery | 5 studies | 24% ± 6% | |
astrocyte | 5 studies | 31% ± 10% | |
club cell | 4 studies | 26% ± 7% | |
smooth muscle cell | 4 studies | 22% ± 1% | |
glomerular endothelial cell | 3 studies | 27% ± 1% | |
ciliated cell | 3 studies | 21% ± 3% | |
GABAergic neuron | 3 studies | 23% ± 4% | |
glutamatergic neuron | 3 studies | 24% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 3% | |
alveolar macrophage | 3 studies | 27% ± 8% | |
macrophage | 3 studies | 22% ± 7% | |
interneuron | 3 studies | 31% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 4629.81 | 180 / 180 | 99% | 23.39 | 427 / 430 |
esophagus | 100% | 4167.31 | 1442 / 1445 | 99% | 22.51 | 182 / 183 |
breast | 100% | 6702.53 | 459 / 459 | 99% | 16.29 | 1107 / 1118 |
intestine | 100% | 4317.59 | 966 / 966 | 99% | 17.56 | 521 / 527 |
lung | 100% | 14190.88 | 578 / 578 | 98% | 20.92 | 1137 / 1155 |
skin | 100% | 3579.55 | 1808 / 1809 | 98% | 13.49 | 464 / 472 |
stomach | 99% | 2665.81 | 355 / 359 | 99% | 19.44 | 284 / 286 |
kidney | 100% | 4367.49 | 89 / 89 | 98% | 30.63 | 881 / 901 |
thymus | 100% | 7540.49 | 653 / 653 | 96% | 39.95 | 580 / 605 |
uterus | 100% | 6343.55 | 170 / 170 | 95% | 17.09 | 437 / 459 |
prostate | 100% | 4530.96 | 245 / 245 | 95% | 10.60 | 475 / 502 |
bladder | 100% | 3941.38 | 21 / 21 | 94% | 13.63 | 473 / 504 |
adrenal gland | 100% | 2528.74 | 258 / 258 | 93% | 10.17 | 214 / 230 |
brain | 93% | 1566.70 | 2458 / 2642 | 100% | 12.45 | 703 / 705 |
pancreas | 92% | 1484.12 | 301 / 328 | 97% | 21.02 | 173 / 178 |
adipose | 100% | 7123.01 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 4059.66 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.41 | 1 / 1 |
heart | 100% | 3127.59 | 860 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4719.44 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 14.81 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 91% | 11.09 | 41 / 45 |
muscle | 82% | 1059.02 | 656 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 2.39 | 12 / 29 |
liver | 14% | 160.88 | 32 / 226 | 26% | 3.57 | 104 / 406 |
peripheral blood | 9% | 95.45 | 85 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006396 | Biological process | RNA processing |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0008143 | Molecular function | poly(A) binding |
GO_0003730 | Molecular function | mRNA 3'-UTR binding |
GO_0008266 | Molecular function | poly(U) RNA binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RBMS2 |
Protein name | RNA binding motif single stranded interacting protein 2 RNA-binding motif, single-stranded-interacting protein 2 (Suppressor of CDC2 with RNA-binding motif 3) |
Synonyms | SCR3 |
Description | |
Accessions | ENST00000552916.5 F8VQS9 F5H5C8 ENST00000550726.5 F8W1T6 F8VV01 ENST00000551369.5 ENST00000262031.10 ENST00000542360.1 ENST00000552247.6 F8VZR4 Q15434 |