ARL6IP4 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
natural killer cell	39 studies	44% ± 14%	Explore
B cell	38 studies	43% ± 14%	Explore
macrophage	35 studies	45% ± 14%	Explore
endothelial cell	35 studies	41% ± 17%	Explore
fibroblast	35 studies	43% ± 14%	Explore
CD8-positive, alpha-beta T cell	35 studies	44% ± 18%	Explore
CD4-positive, alpha-beta T cell	31 studies	47% ± 16%	Explore
T cell	29 studies	45% ± 13%	Explore
pericyte	28 studies	46% ± 17%	Explore
conventional dendritic cell	27 studies	53% ± 14%	Explore
regulatory T cell	26 studies	44% ± 12%	Explore
smooth muscle cell	25 studies	46% ± 13%	Explore
classical monocyte	25 studies	48% ± 14%	Explore
non-classical monocyte	23 studies	61% ± 16%	Explore
dendritic cell	22 studies	50% ± 21%	Explore
mature NK T cell	21 studies	39% ± 13%	Explore
endothelial cell of lymphatic vessel	20 studies	51% ± 16%	Explore
memory B cell	20 studies	43% ± 9%	Explore
epithelial cell	20 studies	50% ± 19%	Explore
mast cell	19 studies	48% ± 16%	Explore
monocyte	19 studies	47% ± 13%	Explore
plasma cell	19 studies	46% ± 17%	Explore
naive B cell	19 studies	36% ± 10%	Explore
plasmacytoid dendritic cell	19 studies	40% ± 13%	Explore
basal cell	19 studies	47% ± 15%	Explore
gamma-delta T cell	18 studies	44% ± 15%	Explore
ciliated cell	17 studies	51% ± 19%	Explore
connective tissue cell	17 studies	48% ± 13%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	43% ± 12%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	41% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	47% ± 14%	Explore
mucosal invariant T cell	14 studies	37% ± 11%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	47% ± 14%	Explore
myofibroblast cell	14 studies	47% ± 13%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	41% ± 16%	Explore
capillary endothelial cell	13 studies	33% ± 12%	Explore
endothelial cell of artery	12 studies	45% ± 16%	Explore
myeloid cell	12 studies	49% ± 16%	Explore
innate lymphoid cell	11 studies	40% ± 13%	Explore
plasmablast	11 studies	54% ± 21%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	45% ± 15%	Explore
secretory cell	11 studies	45% ± 14%	Explore
vein endothelial cell	11 studies	44% ± 16%	Explore
endothelial cell of vascular tree	11 studies	41% ± 10%	Explore
club cell	9 studies	34% ± 12%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	45% ± 15%	Explore
abnormal cell	9 studies	54% ± 13%	Explore
type I pneumocyte	8 studies	35% ± 13%	Explore
type II pneumocyte	8 studies	45% ± 17%	Explore
leukocyte	8 studies	45% ± 15%	Explore
progenitor cell	8 studies	59% ± 10%	Explore
T follicular helper cell	8 studies	49% ± 8%	Explore
alveolar macrophage	7 studies	39% ± 12%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	45% ± 15%	Explore
mesothelial cell	7 studies	48% ± 18%	Explore
IgA plasma cell	7 studies	29% ± 11%	Explore
IgG plasma cell	7 studies	29% ± 11%	Explore
hematopoietic stem cell	7 studies	49% ± 16%	Explore
CD4-positive helper T cell	6 studies	31% ± 9%	Explore
hematopoietic precursor cell	6 studies	54% ± 26%	Explore
ionocyte	6 studies	41% ± 10%	Explore
respiratory goblet cell	6 studies	33% ± 7%	Explore
effector CD4-positive, alpha-beta T cell	6 studies	46% ± 18%	Explore
mononuclear phagocyte	6 studies	51% ± 21%	Explore
epithelial cell of proximal tubule	6 studies	50% ± 9%	Explore
renal alpha-intercalated cell	6 studies	46% ± 10%	Explore
enterocyte	6 studies	51% ± 18%	Explore
goblet cell	6 studies	50% ± 18%	Explore
precursor B cell	6 studies	40% ± 12%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	53% ± 17%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	36% ± 8%	Explore
exhausted T cell	5 studies	56% ± 17%	Explore
kidney loop of Henle epithelial cell	5 studies	41% ± 1%	Explore
neuron	5 studies	51% ± 19%	Explore
pro-B cell	5 studies	42% ± 15%	Explore
microglial cell	5 studies	31% ± 11%	Explore
double negative thymocyte	5 studies	57% ± 17%	Explore
intermediate monocyte	5 studies	63% ± 18%	Explore
granulocyte	5 studies	46% ± 16%	Explore
erythrocyte	5 studies	45% ± 21%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	35% ± 8%	Explore
deuterosomal cell	4 studies	37% ± 10%	Explore
platelet	4 studies	20% ± 8%	Explore
glomerular endothelial cell	4 studies	38% ± 13%	Explore
enteroendocrine cell	4 studies	65% ± 15%	Explore
transit amplifying cell	4 studies	50% ± 27%	Explore
brush cell	4 studies	41% ± 12%	Explore
immature B cell	4 studies	48% ± 11%	Explore
adventitial cell	4 studies	30% ± 3%	Explore
mucus secreting cell	4 studies	41% ± 19%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	52% ± 8%	Explore
luminal cell of prostate epithelium	4 studies	40% ± 16%	Explore
astrocyte	4 studies	20% ± 4%	Explore
hepatocyte	4 studies	48% ± 28%	Explore
group 3 innate lymphoid cell	4 studies	51% ± 12%	Explore
T-helper 17 cell	4 studies	55% ± 17%	Explore
T-helper 1 cell	4 studies	56% ± 9%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	47% ± 18%	Explore
duct epithelial cell	3 studies	44% ± 7%	Explore
hillock cell	3 studies	35% ± 14%	Explore
precursor cell	3 studies	59% ± 9%	Explore
squamous epithelial cell	3 studies	38% ± 27%	Explore
pancreatic A cell	3 studies	66% ± 16%	Explore
type B pancreatic cell	3 studies	72% ± 14%	Explore
podocyte	3 studies	52% ± 9%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	58% ± 9%	Explore
intestinal crypt stem cell	3 studies	57% ± 7%	Explore
neural crest cell	3 studies	55% ± 6%	Explore
glutamatergic neuron	3 studies	31% ± 21%	Explore
OFF-bipolar cell	3 studies	37% ± 31%	Explore
retinal ganglion cell	3 studies	69% ± 23%	Explore
erythroblast	3 studies	51% ± 22%	Explore
lymphocyte	3 studies	59% ± 6%	Explore
megakaryocyte	3 studies	36% ± 4%	Explore
neuroendocrine cell	3 studies	58% ± 17%	Explore
retina horizontal cell	3 studies	25% ± 6%	Explore
serous secreting cell	3 studies	57% ± 14%	Explore
tissue-resident macrophage	3 studies	33% ± 13%	Explore
intraepithelial lymphocyte	3 studies	38% ± 15%	Explore
germinal center B cell	3 studies	51% ± 1%	Explore
myoepithelial cell	3 studies	48% ± 7%	Explore
inflammatory macrophage	3 studies	38% ± 7%	Explore
IgM plasma cell	3 studies	35% ± 12%	Explore
oligodendrocyte	3 studies	16% ± 1%	Explore
oligodendrocyte precursor cell	3 studies	33% ± 13%	Explore
granulocyte monocyte progenitor cell	3 studies	50% ± 28%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	58% ± 27%	Explore
neutrophil	3 studies	27% ± 2%	Explore
glial cell	3 studies	47% ± 23%	Explore
keratinocyte	3 studies	38% ± 4%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	45% ± 9%	Explore
progenitor cell of mammary luminal epithelium	3 studies	53% ± 3%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	18 studies	49% ± 13%	Explore
lung	17 studies	46% ± 14%	Explore
intestine	10 studies	46% ± 18%	Explore
kidney	8 studies	46% ± 12%	Explore
brain	7 studies	31% ± 14%	Explore
eye	5 studies	26% ± 4%	Explore
lymph node	5 studies	54% ± 14%	Explore
liver	5 studies	50% ± 17%	Explore
placenta	4 studies	34% ± 19%	Explore
bone marrow	4 studies	35% ± 15%	Explore
uterus	4 studies	58% ± 13%	Explore
breast	4 studies	48% ± 8%	Explore
prostate	4 studies	33% ± 14%	Explore
pancreas	3 studies	65% ± 18%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	5697.19	2639 / 2642	25%	0.36	175 / 705
bladder	100%	6441.76	21 / 21	15%	0.22	78 / 504
uterus	100%	6158.71	170 / 170	14%	0.20	66 / 459
thymus	100%	6090.65	653 / 653	14%	0.19	84 / 605
adrenal gland	100%	7122.06	258 / 258	13%	0.18	29 / 230
kidney	100%	6516.99	89 / 89	9%	0.14	85 / 901
prostate	100%	7529.88	245 / 245	9%	0.12	44 / 502
pancreas	100%	4344.90	328 / 328	7%	0.10	13 / 178
stomach	100%	5135.95	359 / 359	5%	0.07	14 / 286
ovary	100%	6529.08	180 / 180	5%	0.07	21 / 430
lung	100%	5077.35	577 / 578	5%	0.07	58 / 1155
intestine	100%	6278.04	966 / 966	4%	0.05	21 / 527
liver	100%	5246.35	226 / 226	4%	0.05	16 / 406
skin	100%	4780.99	1809 / 1809	3%	0.04	15 / 472
breast	100%	5599.63	459 / 459	3%	0.04	32 / 1118
adipose	100%	5342.83	1204 / 1204	0%	0	0 / 0
blood vessel	100%	7093.31	1335 / 1335	0%	0	0 / 0
esophagus	100%	5831.96	1445 / 1445	0%	0	0 / 183
spleen	100%	7842.69	241 / 241	0%	0	0 / 0
heart	100%	4543.62	860 / 861	0%	0	0 / 0
muscle	100%	4688.49	801 / 803	0%	0	0 / 0
peripheral blood	98%	3931.52	913 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	21%	0.28	6 / 29
tonsil	0%	0	0 / 0	7%	0.09	3 / 45
eye	0%	0	0 / 0	1%	0.01	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

IV. Literature review

[source]

Gene name	ARL6IP4
Protein name	ADP-ribosylation factor-like protein 6-interacting protein 4 (ARL-6-interacting protein 4) (Aip-4) (HSP-975) (HSVI-binding protein) (SR-15) (SRp25) (SR-25) (Splicing factor SRrp37) ADP ribosylation factor like GTPase 6 interacting protein 4 ADP-ribosylation factor-like protein 6-interacting protein 4
Synonyms	hCG_33180
Description	FUNCTION: Involved in modulating alternative pre-mRNA splicing with either 5' distal site activation or preferential use of 3' proximal site. In case of infection by Herpes simplex virus (HSVI), may act as a splicing inhibitor of HSVI pre-mRNA. .
Accessions	Q66PJ3 ENST00000412505.6 H7BZV4 ENST00000392435.7 [Q66PJ3-10] A0A0C4DH18 ENST00000456762.3 [Q66PJ3-10] ENST00000392435 ENST00000456762 ENST00000543566 ENST00000315580 ENST00000539770.6 F5GYV5 ENST00000315580.10 [Q66PJ3-8] ENST00000439686.6 A0A8C8KBE9 ENST00000543566.6 [Q66PJ3-9] ENST00000454885.6 [Q66PJ3-7] A0A0C4DG62 A0A0A0MTG7 ENST00000413381.6 ENST00000357866 ENST00000357866.4 [Q66PJ3-5] F8WCT1 F8WEP2 ENST00000426960.6 [Q66PJ3-9] ENST00000442210.2 ENST00000426960 ENST00000453766.7

GO_0008380	Biological process	RNA splicing
GO_0006397	Biological process	mRNA processing
GO_0016607	Cellular component	nuclear speck
GO_0005730	Cellular component	nucleolus
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

ARL6IP4 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review