Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2670.50 | 1445 / 1445 | 100% | 13.33 | 183 / 183 |
brain | 100% | 2819.07 | 2640 / 2642 | 100% | 21.62 | 704 / 705 |
prostate | 100% | 2817.60 | 245 / 245 | 100% | 15.13 | 500 / 502 |
thymus | 100% | 3381.57 | 653 / 653 | 99% | 16.30 | 600 / 605 |
lung | 100% | 2442.18 | 577 / 578 | 99% | 9.39 | 1140 / 1155 |
adrenal gland | 100% | 2552.53 | 258 / 258 | 98% | 13.44 | 226 / 230 |
pancreas | 100% | 1410.14 | 327 / 328 | 98% | 10.32 | 175 / 178 |
breast | 100% | 2449.76 | 459 / 459 | 98% | 12.81 | 1093 / 1118 |
stomach | 100% | 2018.04 | 359 / 359 | 97% | 10.94 | 278 / 286 |
kidney | 100% | 2004.88 | 89 / 89 | 97% | 16.13 | 875 / 901 |
uterus | 100% | 2912.04 | 170 / 170 | 97% | 8.21 | 443 / 459 |
ovary | 100% | 2988.18 | 180 / 180 | 96% | 8.46 | 414 / 430 |
intestine | 100% | 2688.83 | 966 / 966 | 96% | 8.58 | 506 / 527 |
bladder | 100% | 2675.52 | 21 / 21 | 96% | 7.83 | 482 / 504 |
skin | 100% | 2291.46 | 1807 / 1809 | 92% | 11.66 | 433 / 472 |
liver | 100% | 1101.04 | 225 / 226 | 80% | 5.05 | 325 / 406 |
adipose | 100% | 2448.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3425.49 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2069.55 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1927.95 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 98% | 1827.22 | 847 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 8.57 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 88% | 7.89 | 70 / 80 |
lymph node | 0% | 0 | 0 / 0 | 86% | 6.80 | 25 / 29 |
peripheral blood | 37% | 676.51 | 342 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0050673 | Biological process | epithelial cell proliferation |
GO_0006268 | Biological process | DNA unwinding involved in DNA replication |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0046651 | Biological process | lymphocyte proliferation |
GO_0006270 | Biological process | DNA replication initiation |
GO_0098963 | Biological process | dendritic transport of messenger ribonucleoprotein complex |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0007399 | Biological process | nervous system development |
GO_0017148 | Biological process | negative regulation of translation |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0043025 | Cellular component | neuronal cell body |
GO_0098794 | Cellular component | postsynapse |
GO_0000781 | Cellular component | chromosome, telomeric region |
GO_0032839 | Cellular component | dendrite cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003697 | Molecular function | single-stranded DNA binding |
GO_0000900 | Molecular function | mRNA regulatory element binding translation repressor activity |
GO_0140416 | Molecular function | transcription regulator inhibitor activity |
GO_0046332 | Molecular function | SMAD binding |
GO_0003691 | Molecular function | double-stranded telomeric DNA binding |
GO_0003723 | Molecular function | RNA binding |
GO_0032422 | Molecular function | purine-rich negative regulatory element binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PURA |
Protein name | PURA protein Purine-rich element binding protein A Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha) Purine rich element binding protein A |
Synonyms | PUR1 |
Description | FUNCTION: This is a probable transcription activator that specifically binds the purine-rich single strand of the PUR element located upstream of the MYC gene. May play a role in the initiation of DNA replication and in recombination. |
Accessions | Q00577 ENST00000502351.1 A0A494C0X8 Q2NLC9 A0A494C0H6 Q2NLD4 ENST00000331327.5 ENST00000505703.2 ENST00000651386.1 Q56A79 |