I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| GABAergic neuron | 3 studies | 18% ± 3% | |
| glutamatergic neuron | 3 studies | 25% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| GABAergic neuron | 3 studies | 18% ± 3% | |
| glutamatergic neuron | 3 studies | 25% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 816.96 | 2639 / 2642 | 100% | 4.98 | 705 / 705 |
| esophagus | 100% | 746.63 | 1444 / 1445 | 99% | 3.29 | 182 / 183 |
| breast | 100% | 794.88 | 459 / 459 | 99% | 4.20 | 1110 / 1118 |
| thymus | 100% | 1056.06 | 653 / 653 | 99% | 3.46 | 598 / 605 |
| uterus | 100% | 808.30 | 170 / 170 | 98% | 3.22 | 450 / 459 |
| prostate | 100% | 835.62 | 245 / 245 | 98% | 3.01 | 490 / 502 |
| stomach | 99% | 585.40 | 355 / 359 | 99% | 2.95 | 282 / 286 |
| adrenal gland | 100% | 1164.40 | 258 / 258 | 97% | 4.03 | 224 / 230 |
| intestine | 100% | 774.18 | 965 / 966 | 97% | 2.89 | 513 / 527 |
| kidney | 100% | 664.60 | 89 / 89 | 97% | 3.27 | 872 / 901 |
| bladder | 100% | 951.76 | 21 / 21 | 96% | 2.71 | 485 / 504 |
| ovary | 99% | 899.86 | 179 / 180 | 97% | 2.72 | 415 / 430 |
| skin | 100% | 1120.22 | 1809 / 1809 | 95% | 3.85 | 450 / 472 |
| pancreas | 98% | 377.58 | 321 / 328 | 97% | 2.37 | 172 / 178 |
| lung | 90% | 468.66 | 520 / 578 | 99% | 2.75 | 1140 / 1155 |
| liver | 100% | 648.91 | 226 / 226 | 88% | 1.82 | 357 / 406 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 3.14 | 29 / 29 |
| spleen | 100% | 741.07 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 3.25 | 45 / 45 |
| adipose | 100% | 787.56 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 100% | 872.02 | 802 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 625.40 | 1333 / 1335 | 0% | 0 | 0 / 0 |
| heart | 97% | 732.60 | 836 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 81% | 2.37 | 65 / 80 |
| peripheral blood | 50% | 419.78 | 465 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0050684 | Biological process | regulation of mRNA processing |
| GO_0010468 | Biological process | regulation of gene expression |
| GO_0007275 | Biological process | multicellular organism development |
| GO_0001822 | Biological process | kidney development |
| GO_0007005 | Biological process | mitochondrion organization |
| GO_0001889 | Biological process | liver development |
| GO_0006397 | Biological process | mRNA processing |
| GO_0055010 | Biological process | ventricular cardiac muscle tissue morphogenesis |
| GO_0055001 | Biological process | muscle cell development |
| GO_0005739 | Cellular component | mitochondrion |
| GO_0005515 | Molecular function | protein binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | PTCD2 |
| Protein name | Pentatricopeptide repeat domain 2 Pentatricopeptide repeat-containing protein 2, mitochondrial |
| Synonyms | |
| Description | FUNCTION: Involved in mitochondrial RNA maturation and mitochondrial respiratory chain function. . |
| Accessions | ENST00000308077.9 [Q8WV60-1] ENST00000536805.5 [Q8WV60-2] ENST00000503315.5 B7Z8R2 D6RJH8 D6RGK0 Q8WV60 ENST00000515198.5 ENST00000503868.5 [Q8WV60-3] ENST00000486995.5 ENST00000511752.5 F6S289 ENST00000543322.5 ENST00000380639.10 [Q8WV60-1] E5RHU2 D6RIZ0 ENST00000510676.6 |
