Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 33% ± 14% | |
astrocyte | 16 studies | 39% ± 16% | |
oligodendrocyte | 13 studies | 37% ± 13% | |
glutamatergic neuron | 12 studies | 75% ± 23% | |
oligodendrocyte precursor cell | 12 studies | 48% ± 16% | |
GABAergic neuron | 11 studies | 54% ± 26% | |
microglial cell | 11 studies | 34% ± 9% | |
adipocyte | 9 studies | 27% ± 5% | |
dendritic cell | 8 studies | 26% ± 11% | |
neuron | 7 studies | 50% ± 21% | |
macrophage | 7 studies | 33% ± 11% | |
fibroblast | 7 studies | 24% ± 9% | |
T cell | 7 studies | 20% ± 4% | |
epithelial cell | 6 studies | 31% ± 12% | |
interneuron | 6 studies | 63% ± 24% | |
pericyte | 6 studies | 24% ± 8% | |
plasmacytoid dendritic cell | 6 studies | 22% ± 5% | |
mast cell | 5 studies | 21% ± 5% | |
myeloid cell | 5 studies | 20% ± 5% | |
endothelial cell of lymphatic vessel | 5 studies | 29% ± 6% | |
smooth muscle cell | 5 studies | 23% ± 4% | |
granule cell | 4 studies | 49% ± 17% | |
B cell | 4 studies | 23% ± 8% | |
cardiac muscle cell | 4 studies | 22% ± 2% | |
lymphocyte | 4 studies | 27% ± 9% | |
amacrine cell | 4 studies | 34% ± 9% | |
retina horizontal cell | 4 studies | 38% ± 12% | |
retinal cone cell | 4 studies | 33% ± 9% | |
retinal rod cell | 4 studies | 34% ± 6% | |
basal cell | 4 studies | 30% ± 16% | |
GABAergic interneuron | 3 studies | 60% ± 5% | |
plasma cell | 3 studies | 33% ± 3% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
GABAergic amacrine cell | 3 studies | 39% ± 10% | |
Mueller cell | 3 studies | 27% ± 8% | |
glycinergic amacrine cell | 3 studies | 37% ± 8% | |
retinal ganglion cell | 3 studies | 49% ± 9% | |
endothelial cell of vascular tree | 3 studies | 27% ± 14% | |
hepatocyte | 3 studies | 36% ± 12% | |
alveolar macrophage | 3 studies | 26% ± 6% | |
ciliated cell | 3 studies | 18% ± 1% | |
monocyte | 3 studies | 28% ± 2% | |
natural killer cell | 3 studies | 21% ± 4% | |
goblet cell | 3 studies | 25% ± 11% | |
transit amplifying cell | 3 studies | 41% ± 25% | |
CD8-positive, alpha-beta T cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1342.82 | 180 / 180 | 100% | 18.82 | 430 / 430 |
stomach | 100% | 1148.92 | 359 / 359 | 100% | 19.15 | 286 / 286 |
intestine | 100% | 1588.75 | 964 / 966 | 100% | 17.90 | 527 / 527 |
uterus | 100% | 1609.46 | 170 / 170 | 100% | 17.95 | 458 / 459 |
breast | 100% | 1371.08 | 458 / 459 | 100% | 19.65 | 1116 / 1118 |
prostate | 100% | 1440.95 | 244 / 245 | 100% | 13.10 | 502 / 502 |
esophagus | 100% | 1475.04 | 1438 / 1445 | 100% | 24.10 | 183 / 183 |
bladder | 100% | 1504.67 | 21 / 21 | 99% | 14.95 | 501 / 504 |
brain | 99% | 5087.38 | 2622 / 2642 | 100% | 22.33 | 705 / 705 |
thymus | 100% | 1520.58 | 652 / 653 | 99% | 12.49 | 601 / 605 |
lung | 99% | 1192.78 | 571 / 578 | 100% | 17.80 | 1153 / 1155 |
skin | 100% | 1754.36 | 1800 / 1809 | 98% | 15.70 | 462 / 472 |
adrenal gland | 100% | 1726.44 | 258 / 258 | 96% | 12.45 | 221 / 230 |
pancreas | 96% | 837.96 | 316 / 328 | 99% | 11.55 | 177 / 178 |
kidney | 100% | 1244.10 | 89 / 89 | 95% | 9.48 | 855 / 901 |
liver | 91% | 675.27 | 206 / 226 | 92% | 7.20 | 375 / 406 |
adipose | 100% | 1439.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 18.07 | 29 / 29 |
muscle | 100% | 2442.62 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1551.17 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.87 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.33 | 1 / 1 |
blood vessel | 100% | 1437.87 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 89% | 875.89 | 766 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 6.14 | 69 / 80 |
peripheral blood | 70% | 1760.27 | 652 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0003723 | Molecular function | RNA binding |
Gene name | R3HDM1 |
Protein name | R3H domain containing 1 R3HDM1 protein R3H domain-containing protein 1 |
Synonyms | KIAA0029 R3HDM |
Description | |
Accessions | H7C2F9 Q9BVG5 ENST00000410054.5 [Q15032-4] H7BZ47 ENST00000264160.8 [Q15032-1] ENST00000409606.5 [Q15032-3] C9JIX1 H7C3T7 C9JIX3 A0A804HIA8 ENST00000456040.1 ENST00000683871.1 ENST00000628915.2 [Q15032-2] Q15032 ENST00000445855.1 ENST00000438014.5 ENST00000425804.1 ENST00000409478.5 [Q15032-2] ENST00000436436.5 ENST00000441871.5 H7C1X4 |