RPS12 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	50 studies	92% ± 17%	Explore
macrophage	46 studies	80% ± 25%	Explore
natural killer cell	44 studies	92% ± 13%	Explore
endothelial cell	43 studies	76% ± 27%	Explore
T cell	41 studies	86% ± 21%	Explore
fibroblast	41 studies	85% ± 25%	Explore
CD8-positive, alpha-beta T cell	40 studies	92% ± 15%	Explore
CD4-positive, alpha-beta T cell	36 studies	93% ± 14%	Explore
pericyte	35 studies	83% ± 25%	Explore
conventional dendritic cell	32 studies	97% ± 4%	Explore
plasmacytoid dendritic cell	31 studies	97% ± 5%	Explore
dendritic cell	29 studies	90% ± 18%	Explore
endothelial cell of lymphatic vessel	28 studies	82% ± 27%	Explore
smooth muscle cell	28 studies	84% ± 26%	Explore
plasma cell	27 studies	86% ± 20%	Explore
regulatory T cell	27 studies	96% ± 9%	Explore
classical monocyte	26 studies	92% ± 13%	Explore
mast cell	25 studies	84% ± 21%	Explore
monocyte	25 studies	84% ± 21%	Explore
mature NK T cell	25 studies	87% ± 21%	Explore
non-classical monocyte	25 studies	93% ± 13%	Explore
epithelial cell	25 studies	88% ± 21%	Explore
gamma-delta T cell	21 studies	96% ± 6%	Explore
memory B cell	21 studies	99% ± 3%	Explore
basal cell	21 studies	92% ± 13%	Explore
naive B cell	19 studies	94% ± 18%	Explore
connective tissue cell	19 studies	92% ± 13%	Explore
mucosal invariant T cell	17 studies	96% ± 10%	Explore
ciliated cell	16 studies	78% ± 21%	Explore
erythrocyte	16 studies	70% ± 25%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	96% ± 11%	Explore
endothelial cell of artery	16 studies	82% ± 17%	Explore
capillary endothelial cell	16 studies	74% ± 19%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	92% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	92% ± 16%	Explore
vein endothelial cell	15 studies	82% ± 22%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	99% ± 2%	Explore
neutrophil	14 studies	63% ± 28%	Explore
myofibroblast cell	14 studies	90% ± 20%	Explore
myeloid cell	14 studies	83% ± 24%	Explore
innate lymphoid cell	13 studies	97% ± 3%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	95% ± 11%	Explore
mesothelial cell	13 studies	80% ± 26%	Explore
endothelial cell of vascular tree	13 studies	87% ± 21%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	89% ± 20%	Explore
plasmablast	12 studies	95% ± 6%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	95% ± 7%	Explore
secretory cell	12 studies	94% ± 8%	Explore
astrocyte	12 studies	39% ± 19%	Explore
goblet cell	12 studies	82% ± 22%	Explore
leukocyte	11 studies	81% ± 27%	Explore
type II pneumocyte	10 studies	79% ± 29%	Explore
T follicular helper cell	10 studies	99% ± 1%	Explore
progenitor cell	10 studies	92% ± 14%	Explore
IgG plasma cell	10 studies	82% ± 21%	Explore
microglial cell	10 studies	65% ± 30%	Explore
hematopoietic stem cell	10 studies	86% ± 28%	Explore
type I pneumocyte	9 studies	77% ± 24%	Explore
neuron	9 studies	65% ± 24%	Explore
IgA plasma cell	9 studies	79% ± 24%	Explore
club cell	8 studies	90% ± 18%	Explore
platelet	8 studies	70% ± 20%	Explore
abnormal cell	8 studies	81% ± 27%	Explore
enterocyte	8 studies	77% ± 20%	Explore
respiratory goblet cell	7 studies	87% ± 16%	Explore
mononuclear phagocyte	7 studies	86% ± 22%	Explore
oligodendrocyte	7 studies	31% ± 12%	Explore
epithelial cell of proximal tubule	7 studies	82% ± 21%	Explore
enteroendocrine cell	7 studies	91% ± 11%	Explore
transit amplifying cell	7 studies	81% ± 26%	Explore
retinal rod cell	7 studies	57% ± 24%	Explore
alveolar macrophage	6 studies	85% ± 26%	Explore
CD4-positive helper T cell	6 studies	97% ± 3%	Explore
ionocyte	6 studies	87% ± 14%	Explore
glutamatergic neuron	6 studies	36% ± 11%	Explore
kidney loop of Henle epithelial cell	6 studies	85% ± 21%	Explore
renal alpha-intercalated cell	6 studies	99% ± 1%	Explore
erythroblast	6 studies	81% ± 21%	Explore
intestinal crypt stem cell	6 studies	78% ± 31%	Explore
amacrine cell	6 studies	57% ± 23%	Explore
retinal ganglion cell	6 studies	61% ± 23%	Explore
precursor B cell	6 studies	99% ± 2%	Explore
brush cell	6 studies	89% ± 11%	Explore
immature B cell	6 studies	99% ± 1%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	99% ± 1%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	94% ± 13%	Explore
melanocyte	6 studies	83% ± 23%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	99% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	96% ± 5%	Explore
hematopoietic precursor cell	5 studies	95% ± 6%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	98% ± 2%	Explore
megakaryocyte	5 studies	84% ± 14%	Explore
OFF-bipolar cell	5 studies	68% ± 26%	Explore
ON-bipolar cell	5 studies	65% ± 25%	Explore
retinal cone cell	5 studies	61% ± 25%	Explore
lymphocyte	5 studies	87% ± 25%	Explore
glial cell	5 studies	77% ± 16%	Explore
T-helper 17 cell	5 studies	99% ± 1%	Explore
group 3 innate lymphoid cell	5 studies	98% ± 1%	Explore
Mueller cell	5 studies	68% ± 18%	Explore
inflammatory macrophage	5 studies	78% ± 17%	Explore
double negative thymocyte	5 studies	99% ± 1%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	99% ± 1%	Explore
granulocyte	5 studies	97% ± 3%	Explore
GABAergic neuron	5 studies	30% ± 9%	Explore
intermediate monocyte	5 studies	93% ± 10%	Explore
oligodendrocyte precursor cell	5 studies	43% ± 29%	Explore
interneuron	5 studies	46% ± 26%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	86% ± 21%	Explore
deuterosomal cell	4 studies	79% ± 18%	Explore
duct epithelial cell	4 studies	98% ± 0%	Explore
exhausted T cell	4 studies	95% ± 8%	Explore
precursor cell	4 studies	85% ± 24%	Explore
pancreatic A cell	4 studies	93% ± 11%	Explore
type B pancreatic cell	4 studies	91% ± 13%	Explore
cholangiocyte	4 studies	43% ± 33%	Explore
endothelial cell of sinusoid	4 studies	57% ± 29%	Explore
glomerular endothelial cell	4 studies	86% ± 9%	Explore
kidney connecting tubule epithelial cell	4 studies	94% ± 4%	Explore
podocyte	4 studies	90% ± 7%	Explore
paneth cell	4 studies	91% ± 12%	Explore
GABAergic amacrine cell	4 studies	53% ± 18%	Explore
glycinergic amacrine cell	4 studies	51% ± 17%	Explore
pro-B cell	4 studies	99% ± 1%	Explore
neuroendocrine cell	4 studies	98% ± 1%	Explore
Schwann cell	4 studies	80% ± 32%	Explore
adventitial cell	4 studies	90% ± 15%	Explore
mucus secreting cell	4 studies	81% ± 31%	Explore
retina horizontal cell	4 studies	55% ± 19%	Explore
acinar cell	4 studies	83% ± 21%	Explore
muscle cell	4 studies	62% ± 16%	Explore
germinal center B cell	4 studies	98% ± 1%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	97% ± 4%	Explore
hepatocyte	4 studies	66% ± 31%	Explore
IgM plasma cell	4 studies	87% ± 17%	Explore
keratinocyte	4 studies	98% ± 2%	Explore
T-helper 1 cell	4 studies	100% ± 0%	Explore
Langerhans cell	3 studies	98% ± 1%	Explore
squamous epithelial cell	3 studies	67% ± 19%	Explore
pancreatic D cell	3 studies	98% ± 2%	Explore
hepatic stellate cell	3 studies	30% ± 14%	Explore
renal beta-intercalated cell	3 studies	100% ± 0%	Explore
neural crest cell	3 studies	100% ± 0%	Explore
retinal bipolar neuron	3 studies	60% ± 27%	Explore
renal principal cell	3 studies	93% ± 4%	Explore
thymocyte	3 studies	100% ± 0%	Explore
extravillous trophoblast	3 studies	100% ± 0%	Explore
placental villous trophoblast	3 studies	100% ± 0%	Explore
chondrocyte	3 studies	79% ± 24%	Explore
serous secreting cell	3 studies	88% ± 9%	Explore
tissue-resident macrophage	3 studies	74% ± 29%	Explore
follicular B cell	3 studies	99% ± 1%	Explore
intraepithelial lymphocyte	3 studies	98% ± 1%	Explore
rod bipolar cell	3 studies	75% ± 16%	Explore
myoepithelial cell	3 studies	99% ± 0%	Explore
luminal cell of prostate epithelium	3 studies	100% ± 0%	Explore
monocyte-derived dendritic cell	3 studies	98% ± 3%	Explore
retinal pigment epithelial cell	3 studies	59% ± 19%	Explore
pancreatic ductal cell	3 studies	95% ± 5%	Explore
granulocyte monocyte progenitor cell	3 studies	84% ± 21%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	100% ± 0%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	100% ± 0%	Explore
double-positive, alpha-beta thymocyte	3 studies	99% ± 0%	Explore
progenitor cell of mammary luminal epithelium	3 studies	100% ± 0%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	83% ± 21%	Explore
peripheral blood	19 studies	92% ± 14%	Explore
intestine	13 studies	88% ± 17%	Explore
brain	12 studies	39% ± 19%	Explore
eye	10 studies	66% ± 20%	Explore
kidney	8 studies	82% ± 21%	Explore
liver	7 studies	70% ± 22%	Explore
bone marrow	6 studies	90% ± 11%	Explore
pancreas	5 studies	87% ± 15%	Explore
placenta	5 studies	74% ± 33%	Explore
uterus	5 studies	92% ± 12%	Explore
lymph node	4 studies	99% ± 1%	Explore
heart	4 studies	40% ± 18%	Explore
adipose	4 studies	54% ± 26%	Explore
esophagus	4 studies	75% ± 22%	Explore
prostate	4 studies	87% ± 22%	Explore
skin	4 studies	90% ± 15%	Explore
breast	4 studies	97% ± 3%	Explore
stomach	3 studies	74% ± 15%	Explore
thymus	3 studies	74% ± 36%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	41461.07	1445 / 1445	100%	2880.88	183 / 183
stomach	100%	32147.13	359 / 359	100%	3624.35	286 / 286
skin	100%	68019.55	1808 / 1809	100%	4335.35	472 / 472
ovary	100%	87641.88	180 / 180	100%	3469.11	429 / 430
intestine	100%	39056.68	966 / 966	100%	4764.89	525 / 527
bladder	100%	46565.00	21 / 21	100%	3836.13	502 / 504
lung	100%	37812.54	577 / 578	100%	3821.69	1152 / 1155
uterus	100%	47219.02	170 / 170	100%	4474.03	457 / 459
pancreas	100%	44844.15	328 / 328	99%	3750.06	177 / 178
prostate	100%	41300.53	245 / 245	99%	5085.76	499 / 502
thymus	100%	33806.10	652 / 653	100%	4582.24	602 / 605
breast	100%	52434.31	459 / 459	99%	4251.97	1110 / 1118
liver	100%	17676.03	225 / 226	99%	2803.21	401 / 406
brain	98%	17104.74	2580 / 2642	100%	2775.86	702 / 705
kidney	100%	31624.01	89 / 89	96%	2321.88	867 / 901
adrenal gland	100%	29220.00	258 / 258	91%	2220.44	210 / 230
eye	0%	0	0 / 0	100%	9762.11	80 / 80
lymph node	0%	0	0 / 0	100%	7703.03	29 / 29
spleen	100%	47753.44	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	4066.13	45 / 45
ureter	0%	0	0 / 0	100%	883.74	1 / 1
adipose	100%	47827.02	1203 / 1204	0%	0	0 / 0
blood vessel	100%	32376.95	1332 / 1335	0%	0	0 / 0
peripheral blood	99%	38341.97	921 / 929	0%	0	0 / 0
muscle	99%	23259.01	791 / 803	0%	0	0 / 0
heart	96%	19312.50	824 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006412	Biological process	translation
GO_0090263	Biological process	positive regulation of canonical Wnt signaling pathway
GO_1990145	Biological process	maintenance of translational fidelity
GO_0002181	Biological process	cytoplasmic translation
GO_0042274	Biological process	ribosomal small subunit biogenesis
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0005794	Cellular component	Golgi apparatus
GO_0016020	Cellular component	membrane
GO_0032040	Cellular component	small-subunit processome
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0005737	Cellular component	cytoplasm
GO_0003735	Molecular function	structural constituent of ribosome
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

Gene name	RPS12
Protein name	Small ribosomal subunit protein eS12 (40S ribosomal protein S12)
Synonyms
Description	FUNCTION: Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . Subunit of the 40S ribosomal complex (By similarity). .
Accessions	P25398 ENST00000230050.4

RPS12 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review