Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 14 studies | 21% ± 7% | |
fibroblast | 8 studies | 24% ± 9% | |
epithelial cell | 6 studies | 37% ± 18% | |
CD16-positive, CD56-dim natural killer cell, human | 5 studies | 19% ± 4% | |
hematopoietic precursor cell | 5 studies | 27% ± 6% | |
abnormal cell | 5 studies | 25% ± 7% | |
ciliated cell | 5 studies | 30% ± 8% | |
macrophage | 4 studies | 22% ± 3% | |
astrocyte | 4 studies | 21% ± 4% | |
natural killer cell | 4 studies | 17% ± 1% | |
goblet cell | 4 studies | 23% ± 4% | |
basal cell | 4 studies | 26% ± 8% | |
pancreatic A cell | 3 studies | 29% ± 10% | |
plasmablast | 3 studies | 36% ± 18% | |
myeloid cell | 3 studies | 22% ± 6% | |
pericyte | 3 studies | 18% ± 2% | |
type I pneumocyte | 3 studies | 24% ± 4% | |
GABAergic neuron | 3 studies | 35% ± 5% | |
glutamatergic neuron | 3 studies | 38% ± 9% | |
dendritic cell | 3 studies | 27% ± 7% | |
oligodendrocyte precursor cell | 3 studies | 24% ± 4% | |
granulocyte monocyte progenitor cell | 3 studies | 24% ± 7% | |
enteroendocrine cell | 3 studies | 20% ± 4% | |
transit amplifying cell | 3 studies | 27% ± 4% | |
connective tissue cell | 3 studies | 27% ± 12% | |
plasmacytoid dendritic cell | 3 studies | 21% ± 3% | |
erythroblast | 3 studies | 27% ± 8% | |
oligodendrocyte | 3 studies | 16% ± 0% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 13470.76 | 1445 / 1445 | 100% | 333.61 | 183 / 183 |
liver | 100% | 14661.32 | 226 / 226 | 100% | 233.15 | 406 / 406 |
lung | 100% | 17356.91 | 578 / 578 | 100% | 351.24 | 1155 / 1155 |
ovary | 100% | 21458.64 | 180 / 180 | 100% | 319.24 | 430 / 430 |
breast | 100% | 16575.60 | 459 / 459 | 100% | 379.77 | 1117 / 1118 |
prostate | 100% | 15169.66 | 245 / 245 | 100% | 370.83 | 501 / 502 |
uterus | 100% | 19809.22 | 170 / 170 | 100% | 329.35 | 458 / 459 |
stomach | 100% | 14232.89 | 359 / 359 | 100% | 296.50 | 285 / 286 |
intestine | 100% | 16140.25 | 966 / 966 | 100% | 302.79 | 525 / 527 |
bladder | 100% | 16748.67 | 21 / 21 | 100% | 306.66 | 502 / 504 |
skin | 100% | 23043.59 | 1809 / 1809 | 100% | 437.17 | 470 / 472 |
pancreas | 100% | 12215.70 | 328 / 328 | 99% | 243.05 | 177 / 178 |
thymus | 100% | 19458.67 | 653 / 653 | 99% | 302.26 | 601 / 605 |
kidney | 100% | 14688.04 | 89 / 89 | 99% | 284.18 | 895 / 901 |
brain | 97% | 7095.86 | 2573 / 2642 | 100% | 240.97 | 704 / 705 |
adrenal gland | 100% | 16541.52 | 258 / 258 | 94% | 177.17 | 216 / 230 |
adipose | 100% | 16283.39 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 16418.19 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 325.71 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 179.92 | 29 / 29 |
spleen | 100% | 17902.39 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 354.17 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 115.36 | 1 / 1 |
heart | 99% | 9877.99 | 851 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 5968.40 | 790 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 9111.78 | 880 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0006491 | Biological process | N-glycan processing |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0017177 | Cellular component | glucosidase II complex |
GO_0042470 | Cellular component | melanosome |
GO_0016020 | Cellular component | membrane |
GO_0033919 | Molecular function | glucan 1,3-alpha-glucosidase activity |
GO_0090599 | Molecular function | alpha-glucosidase activity |
GO_0030246 | Molecular function | carbohydrate binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | GANAB |
Protein name | Neutral alpha-glucosidase AB (EC 3.2.1.207) (Alpha-glucosidase 2) (Glucosidase II subunit alpha) Glucosidase II alpha subunit GANAB protein |
Synonyms | G2AN KIAA0088 |
Description | FUNCTION: Catalytic subunit of glucosidase II that cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins . Required for PKD1/Polycystin-1 and PKD2/Polycystin-2 maturation and localization to the cell surface and cilia . . |
Accessions | ENST00000648273.1 ENST00000532402.5 [Q14697-3] Q9BS14 ENST00000534613.5 [Q14697-3] ENST00000534779.5 ENST00000529737.5 ENST00000526210.1 [Q14697-3] E9PKU7 ENST00000356638.8 [Q14697-1] Q14697 ENST00000525994.1 E9PQ69 ENST00000540933.5 E9PNH1 ENST00000346178.8 [Q14697-2] F5H6X6 |