RPS9 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	50 studies	90% ± 19%	Explore
endothelial cell	45 studies	71% ± 29%	Explore
natural killer cell	44 studies	84% ± 20%	Explore
macrophage	43 studies	81% ± 21%	Explore
T cell	41 studies	79% ± 26%	Explore
fibroblast	41 studies	82% ± 25%	Explore
CD8-positive, alpha-beta T cell	38 studies	87% ± 17%	Explore
pericyte	36 studies	78% ± 27%	Explore
CD4-positive, alpha-beta T cell	35 studies	90% ± 16%	Explore
conventional dendritic cell	30 studies	95% ± 6%	Explore
plasmacytoid dendritic cell	29 studies	92% ± 12%	Explore
dendritic cell	28 studies	87% ± 18%	Explore
smooth muscle cell	28 studies	83% ± 25%	Explore
endothelial cell of lymphatic vessel	27 studies	78% ± 26%	Explore
plasma cell	26 studies	83% ± 23%	Explore
classical monocyte	26 studies	92% ± 12%	Explore
regulatory T cell	26 studies	93% ± 11%	Explore
epithelial cell	26 studies	80% ± 27%	Explore
monocyte	25 studies	86% ± 17%	Explore
non-classical monocyte	25 studies	93% ± 13%	Explore
mature NK T cell	24 studies	84% ± 18%	Explore
mast cell	21 studies	77% ± 20%	Explore
gamma-delta T cell	21 studies	88% ± 16%	Explore
memory B cell	21 studies	96% ± 6%	Explore
basal cell	21 studies	88% ± 18%	Explore
naive B cell	18 studies	95% ± 7%	Explore
connective tissue cell	18 studies	92% ± 11%	Explore
ciliated cell	17 studies	76% ± 21%	Explore
mucosal invariant T cell	17 studies	92% ± 11%	Explore
capillary endothelial cell	17 studies	65% ± 23%	Explore
myeloid cell	17 studies	72% ± 30%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	93% ± 11%	Explore
endothelial cell of artery	16 studies	74% ± 22%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	86% ± 16%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	84% ± 15%	Explore
vein endothelial cell	15 studies	79% ± 21%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	95% ± 11%	Explore
neutrophil	14 studies	71% ± 18%	Explore
myofibroblast cell	14 studies	89% ± 17%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	87% ± 20%	Explore
mesothelial cell	13 studies	79% ± 26%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	83% ± 20%	Explore
innate lymphoid cell	12 studies	93% ± 7%	Explore
plasmablast	12 studies	94% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	86% ± 17%	Explore
secretory cell	12 studies	87% ± 17%	Explore
goblet cell	12 studies	78% ± 23%	Explore
endothelial cell of vascular tree	12 studies	84% ± 25%	Explore
erythrocyte	12 studies	63% ± 26%	Explore
type II pneumocyte	11 studies	75% ± 28%	Explore
leukocyte	11 studies	77% ± 28%	Explore
type I pneumocyte	10 studies	67% ± 25%	Explore
T follicular helper cell	10 studies	96% ± 4%	Explore
progenitor cell	10 studies	93% ± 11%	Explore
IgG plasma cell	10 studies	75% ± 26%	Explore
club cell	9 studies	81% ± 24%	Explore
astrocyte	9 studies	42% ± 21%	Explore
IgA plasma cell	9 studies	72% ± 28%	Explore
hematopoietic stem cell	9 studies	90% ± 24%	Explore
respiratory goblet cell	8 studies	69% ± 26%	Explore
platelet	8 studies	50% ± 28%	Explore
abnormal cell	8 studies	81% ± 24%	Explore
neuron	8 studies	68% ± 26%	Explore
enterocyte	8 studies	75% ± 21%	Explore
enteroendocrine cell	8 studies	80% ± 27%	Explore
microglial cell	8 studies	69% ± 24%	Explore
alveolar macrophage	7 studies	78% ± 25%	Explore
mononuclear phagocyte	7 studies	86% ± 20%	Explore
epithelial cell of proximal tubule	7 studies	81% ± 16%	Explore
transit amplifying cell	7 studies	75% ± 29%	Explore
retinal rod cell	7 studies	55% ± 26%	Explore
ionocyte	6 studies	80% ± 21%	Explore
kidney loop of Henle epithelial cell	6 studies	83% ± 14%	Explore
renal alpha-intercalated cell	6 studies	97% ± 2%	Explore
erythroblast	6 studies	71% ± 26%	Explore
intestinal crypt stem cell	6 studies	74% ± 34%	Explore
amacrine cell	6 studies	46% ± 21%	Explore
retinal ganglion cell	6 studies	61% ± 27%	Explore
precursor B cell	6 studies	95% ± 5%	Explore
brush cell	6 studies	85% ± 15%	Explore
glial cell	6 studies	63% ± 25%	Explore
immature B cell	6 studies	94% ± 9%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	97% ± 4%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	85% ± 27%	Explore
CD4-positive helper T cell	5 studies	92% ± 6%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	92% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	87% ± 7%	Explore
hematopoietic precursor cell	5 studies	94% ± 7%	Explore
oligodendrocyte	5 studies	33% ± 12%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	95% ± 4%	Explore
megakaryocyte	5 studies	74% ± 18%	Explore
OFF-bipolar cell	5 studies	60% ± 27%	Explore
ON-bipolar cell	5 studies	57% ± 26%	Explore
retinal cone cell	5 studies	60% ± 27%	Explore
lymphocyte	5 studies	83% ± 28%	Explore
T-helper 17 cell	5 studies	98% ± 3%	Explore
group 3 innate lymphoid cell	5 studies	95% ± 2%	Explore
Mueller cell	5 studies	58% ± 22%	Explore
double negative thymocyte	5 studies	95% ± 4%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	92% ± 13%	Explore
granulocyte	5 studies	90% ± 11%	Explore
intermediate monocyte	5 studies	89% ± 8%	Explore
melanocyte	5 studies	72% ± 28%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	81% ± 20%	Explore
deuterosomal cell	4 studies	75% ± 24%	Explore
duct epithelial cell	4 studies	96% ± 4%	Explore
exhausted T cell	4 studies	91% ± 7%	Explore
precursor cell	4 studies	82% ± 26%	Explore
pancreatic A cell	4 studies	84% ± 17%	Explore
type B pancreatic cell	4 studies	81% ± 19%	Explore
endothelial cell of sinusoid	4 studies	47% ± 30%	Explore
glomerular endothelial cell	4 studies	73% ± 15%	Explore
kidney connecting tubule epithelial cell	4 studies	94% ± 3%	Explore
podocyte	4 studies	87% ± 8%	Explore
GABAergic amacrine cell	4 studies	41% ± 14%	Explore
glycinergic amacrine cell	4 studies	41% ± 15%	Explore
pro-B cell	4 studies	94% ± 1%	Explore
neuroendocrine cell	4 studies	96% ± 2%	Explore
adventitial cell	4 studies	86% ± 14%	Explore
mucus secreting cell	4 studies	80% ± 32%	Explore
retina horizontal cell	4 studies	49% ± 17%	Explore
inflammatory macrophage	4 studies	84% ± 12%	Explore
acinar cell	4 studies	81% ± 15%	Explore
muscle cell	4 studies	63% ± 22%	Explore
germinal center B cell	4 studies	97% ± 2%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	96% ± 6%	Explore
adipocyte	4 studies	24% ± 7%	Explore
hepatocyte	4 studies	73% ± 24%	Explore
IgM plasma cell	4 studies	84% ± 15%	Explore
T-helper 1 cell	4 studies	99% ± 1%	Explore
squamous epithelial cell	3 studies	50% ± 29%	Explore
pancreatic D cell	3 studies	91% ± 7%	Explore
glutamatergic neuron	3 studies	28% ± 15%	Explore
renal beta-intercalated cell	3 studies	99% ± 0%	Explore
neural crest cell	3 studies	99% ± 0%	Explore
paneth cell	3 studies	93% ± 7%	Explore
retinal bipolar neuron	3 studies	54% ± 25%	Explore
renal principal cell	3 studies	90% ± 1%	Explore
thymocyte	3 studies	100% ± 1%	Explore
extravillous trophoblast	3 studies	99% ± 0%	Explore
placental villous trophoblast	3 studies	99% ± 1%	Explore
Schwann cell	3 studies	69% ± 35%	Explore
serous secreting cell	3 studies	85% ± 9%	Explore
tissue-resident macrophage	3 studies	75% ± 26%	Explore
follicular B cell	3 studies	98% ± 2%	Explore
intraepithelial lymphocyte	3 studies	95% ± 2%	Explore
rod bipolar cell	3 studies	66% ± 16%	Explore
chondrocyte	3 studies	64% ± 22%	Explore
myoepithelial cell	3 studies	99% ± 1%	Explore
cholangiocyte	3 studies	54% ± 31%	Explore
luminal cell of prostate epithelium	3 studies	100% ± 0%	Explore
retinal pigment epithelial cell	3 studies	51% ± 25%	Explore
pancreatic ductal cell	3 studies	81% ± 11%	Explore
oligodendrocyte precursor cell	3 studies	59% ± 31%	Explore
granulocyte monocyte progenitor cell	3 studies	71% ± 39%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	99% ± 1%	Explore
keratinocyte	3 studies	96% ± 5%	Explore
interneuron	3 studies	55% ± 27%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	97% ± 2%	Explore
double-positive, alpha-beta thymocyte	3 studies	97% ± 0%	Explore
progenitor cell of mammary luminal epithelium	3 studies	99% ± 0%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	80% ± 18%	Explore
peripheral blood	19 studies	89% ± 15%	Explore
intestine	13 studies	86% ± 16%	Explore
eye	10 studies	57% ± 22%	Explore
brain	8 studies	41% ± 23%	Explore
kidney	8 studies	81% ± 17%	Explore
liver	7 studies	68% ± 24%	Explore
pancreas	5 studies	78% ± 18%	Explore
bone marrow	5 studies	87% ± 14%	Explore
uterus	5 studies	89% ± 16%	Explore
lymph node	4 studies	96% ± 3%	Explore
placenta	4 studies	88% ± 17%	Explore
heart	4 studies	40% ± 18%	Explore
adipose	4 studies	54% ± 25%	Explore
esophagus	4 studies	70% ± 25%	Explore
prostate	4 studies	85% ± 25%	Explore
breast	4 studies	96% ± 4%	Explore
skin	3 studies	79% ± 23%	Explore
stomach	3 studies	58% ± 25%	Explore
thymus	3 studies	84% ± 22%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	20928.82	226 / 226	100%	431.05	406 / 406
ovary	100%	76057.67	180 / 180	100%	681.28	430 / 430
thymus	100%	32584.52	653 / 653	100%	809.96	605 / 605
uterus	100%	42015.53	170 / 170	100%	648.41	459 / 459
prostate	100%	40952.64	245 / 245	100%	909.04	501 / 502
skin	100%	50563.14	1809 / 1809	100%	600.15	471 / 472
adrenal gland	100%	35866.03	258 / 258	100%	386.70	229 / 230
esophagus	100%	35743.23	1445 / 1445	99%	277.84	182 / 183
pancreas	100%	49025.26	328 / 328	99%	580.34	177 / 178
stomach	100%	30492.49	359 / 359	99%	558.12	284 / 286
brain	99%	15459.14	2622 / 2642	100%	431.97	705 / 705
kidney	100%	30280.84	89 / 89	99%	447.17	894 / 901
intestine	100%	34224.81	966 / 966	99%	732.38	522 / 527
lung	100%	33897.53	577 / 578	99%	503.61	1142 / 1155
bladder	100%	37576.48	21 / 21	99%	653.09	497 / 504
breast	100%	46522.17	459 / 459	98%	496.02	1093 / 1118
adipose	100%	40579.07	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	1557.93	80 / 80
lymph node	0%	0	0 / 0	100%	1433.02	29 / 29
spleen	100%	43634.53	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	595.24	45 / 45
ureter	0%	0	0 / 0	100%	389.02	1 / 1
blood vessel	100%	29866.27	1334 / 1335	0%	0	0 / 0
peripheral blood	100%	40785.31	925 / 929	0%	0	0 / 0
muscle	99%	22109.88	795 / 803	0%	0	0 / 0
heart	98%	19449.02	844 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006412	Biological process	translation
GO_0042274	Biological process	ribosomal small subunit biogenesis
GO_0006417	Biological process	regulation of translation
GO_0008284	Biological process	positive regulation of cell population proliferation
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0005840	Cellular component	ribosome
GO_0016020	Cellular component	membrane
GO_0032040	Cellular component	small-subunit processome
GO_0070062	Cellular component	extracellular exosome
GO_0005654	Cellular component	nucleoplasm
GO_0005925	Cellular component	focal adhesion
GO_0005829	Cellular component	cytosol
GO_0045202	Cellular component	synapse
GO_0005737	Cellular component	cytoplasm
GO_1990904	Cellular component	ribonucleoprotein complex
GO_0005634	Cellular component	nucleus
GO_0019843	Molecular function	rRNA binding
GO_0045182	Molecular function	translation regulator activity
GO_0003735	Molecular function	structural constituent of ribosome
GO_0003723	Molecular function	RNA binding
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	RPS9
Protein name	Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS4 (40S ribosomal protein S9)
Synonyms	hCG_2009111
Description	FUNCTION: Component of the small ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . .
Accessions	ENST00000448962.5 ENST00000626065.1 B5MCT8 ENST00000616877.3 ENST00000302907.9 ENST00000391752.5 ENST00000628741.1 ENST00000625297.1 ENST00000445961.5 ENST00000616082.3 ENST00000629607.1 ENST00000611921.4 ENST00000629619.1 ENST00000441429.1 ENST00000611572.3 F2Z3C0 ENST00000614095.4 ENST00000617291.3 ENST00000630768.1 ENST00000618751.3 ENST00000615346.4 ENST00000630852.1 ENST00000626547.2 ENST00000616536.4 ENST00000391753.6 ENST00000614737.4 P46781 ENST00000616928.3 A5D904 ENST00000436445.5 ENST00000620740.4 ENST00000620940.4 ENST00000620720.3 ENST00000615167.4 ENST00000391751.7 ENST00000610826.4 ENST00000620356.4 ENST00000627525.1 ENST00000402367.5 ENST00000616839.3 ENST00000627616.1 C9JM19 ENST00000619229.4 A8MXK4 ENST00000610953.3 ENST00000610644.4

RPS9 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review