Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 7 studies | 34% ± 21% | |
endothelial cell | 6 studies | 22% ± 7% | |
epithelial cell | 6 studies | 29% ± 11% | |
astrocyte | 5 studies | 25% ± 9% | |
oligodendrocyte | 5 studies | 25% ± 6% | |
neuron | 4 studies | 25% ± 7% | |
glutamatergic neuron | 4 studies | 56% ± 21% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 9% | |
interneuron | 4 studies | 42% ± 23% | |
microglial cell | 3 studies | 19% ± 1% | |
erythroblast | 3 studies | 27% ± 8% | |
abnormal cell | 3 studies | 26% ± 6% | |
intestinal crypt stem cell | 3 studies | 24% ± 6% | |
transit amplifying cell | 3 studies | 35% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2443.74 | 1445 / 1445 | 100% | 28.48 | 183 / 183 |
intestine | 100% | 2257.97 | 966 / 966 | 100% | 38.30 | 527 / 527 |
ovary | 100% | 2341.82 | 180 / 180 | 100% | 24.38 | 430 / 430 |
pancreas | 100% | 1470.47 | 328 / 328 | 100% | 21.95 | 178 / 178 |
prostate | 100% | 2030.21 | 245 / 245 | 100% | 25.45 | 502 / 502 |
stomach | 100% | 1861.39 | 359 / 359 | 100% | 33.12 | 286 / 286 |
uterus | 100% | 2306.58 | 170 / 170 | 100% | 26.09 | 459 / 459 |
breast | 100% | 2297.06 | 459 / 459 | 100% | 31.73 | 1116 / 1118 |
bladder | 100% | 2284.57 | 21 / 21 | 100% | 28.17 | 503 / 504 |
skin | 100% | 3251.74 | 1809 / 1809 | 100% | 32.84 | 471 / 472 |
brain | 100% | 2578.59 | 2634 / 2642 | 100% | 34.25 | 705 / 705 |
thymus | 100% | 1811.78 | 653 / 653 | 100% | 18.92 | 603 / 605 |
liver | 100% | 1295.68 | 226 / 226 | 99% | 15.25 | 403 / 406 |
lung | 99% | 1716.80 | 573 / 578 | 100% | 27.36 | 1154 / 1155 |
kidney | 100% | 1428.60 | 89 / 89 | 97% | 15.29 | 873 / 901 |
adrenal gland | 100% | 1760.83 | 258 / 258 | 95% | 21.81 | 219 / 230 |
adipose | 100% | 2190.53 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.58 | 29 / 29 |
muscle | 100% | 3113.98 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1651.24 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 25.65 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.39 | 1 / 1 |
blood vessel | 100% | 1859.27 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 23.93 | 79 / 80 |
heart | 96% | 1689.24 | 828 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 66% | 1573.64 | 616 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0006432 | Biological process | phenylalanyl-tRNA aminoacylation |
GO_0051290 | Biological process | protein heterotetramerization |
GO_0009328 | Cellular component | phenylalanine-tRNA ligase complex |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0004826 | Molecular function | phenylalanine-tRNA ligase activity |
GO_0000287 | Molecular function | magnesium ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | FARSB |
Protein name | Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS) Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) |
Synonyms | FRSB HSPC173 FARSLB |
Description | |
Accessions | ENST00000281828.8 [Q9NSD9-1] Q9BR63 Q9NSD9 |