TBCA | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	43 studies	47% ± 19%	Explore
endothelial cell	42 studies	43% ± 16%	Explore
B cell	41 studies	40% ± 15%	Explore
macrophage	38 studies	44% ± 15%	Explore
natural killer cell	36 studies	36% ± 11%	Explore
pericyte	35 studies	44% ± 19%	Explore
T cell	34 studies	36% ± 14%	Explore
CD8-positive, alpha-beta T cell	34 studies	40% ± 15%	Explore
CD4-positive, alpha-beta T cell	32 studies	41% ± 15%	Explore
smooth muscle cell	30 studies	46% ± 18%	Explore
conventional dendritic cell	28 studies	53% ± 15%	Explore
dendritic cell	24 studies	48% ± 21%	Explore
regulatory T cell	24 studies	44% ± 15%	Explore
endothelial cell of lymphatic vessel	23 studies	47% ± 16%	Explore
non-classical monocyte	23 studies	48% ± 15%	Explore
epithelial cell	23 studies	54% ± 23%	Explore
classical monocyte	23 studies	45% ± 13%	Explore
mast cell	21 studies	34% ± 15%	Explore
plasmacytoid dendritic cell	21 studies	48% ± 14%	Explore
basal cell	21 studies	48% ± 16%	Explore
monocyte	20 studies	45% ± 15%	Explore
memory B cell	20 studies	39% ± 10%	Explore
ciliated cell	19 studies	66% ± 24%	Explore
mature NK T cell	19 studies	36% ± 8%	Explore
naive B cell	18 studies	36% ± 9%	Explore
connective tissue cell	18 studies	54% ± 18%	Explore
gamma-delta T cell	17 studies	39% ± 15%	Explore
plasma cell	15 studies	47% ± 10%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	33% ± 10%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	15 studies	37% ± 9%	Explore
myofibroblast cell	15 studies	51% ± 19%	Explore
astrocyte	15 studies	35% ± 17%	Explore
capillary endothelial cell	14 studies	33% ± 12%	Explore
myeloid cell	14 studies	40% ± 19%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	46% ± 12%	Explore
oligodendrocyte	13 studies	33% ± 14%	Explore
mucosal invariant T cell	13 studies	35% ± 10%	Explore
endothelial cell of vascular tree	13 studies	39% ± 11%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	37% ± 16%	Explore
CD16-negative, CD56-bright natural killer cell, human	12 studies	35% ± 10%	Explore
mesothelial cell	12 studies	55% ± 26%	Explore
vein endothelial cell	12 studies	41% ± 13%	Explore
type I pneumocyte	11 studies	41% ± 17%	Explore
secretory cell	11 studies	48% ± 16%	Explore
progenitor cell	11 studies	55% ± 22%	Explore
goblet cell	11 studies	39% ± 18%	Explore
microglial cell	11 studies	29% ± 11%	Explore
oligodendrocyte precursor cell	11 studies	33% ± 16%	Explore
plasmablast	10 studies	50% ± 22%	Explore
CD4-positive, alpha-beta memory T cell	10 studies	40% ± 17%	Explore
club cell	10 studies	36% ± 15%	Explore
GABAergic neuron	10 studies	34% ± 19%	Explore
effector memory CD8-positive, alpha-beta T cell	10 studies	38% ± 13%	Explore
abnormal cell	10 studies	61% ± 19%	Explore
neuron	10 studies	54% ± 22%	Explore
endothelial cell of artery	10 studies	37% ± 11%	Explore
glutamatergic neuron	10 studies	42% ± 21%	Explore
type II pneumocyte	9 studies	51% ± 19%	Explore
leukocyte	9 studies	43% ± 13%	Explore
innate lymphoid cell	9 studies	40% ± 14%	Explore
adipocyte	9 studies	30% ± 10%	Explore
alveolar macrophage	8 studies	44% ± 18%	Explore
T follicular helper cell	8 studies	38% ± 7%	Explore
retinal rod cell	8 studies	33% ± 18%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	48% ± 17%	Explore
epithelial cell of proximal tubule	7 studies	59% ± 17%	Explore
retinal cone cell	7 studies	49% ± 28%	Explore
hematopoietic precursor cell	6 studies	47% ± 25%	Explore
respiratory goblet cell	6 studies	33% ± 22%	Explore
effector CD4-positive, alpha-beta T cell	6 studies	52% ± 20%	Explore
mononuclear phagocyte	6 studies	50% ± 15%	Explore
kidney loop of Henle epithelial cell	6 studies	49% ± 8%	Explore
renal alpha-intercalated cell	6 studies	67% ± 8%	Explore
enterocyte	6 studies	40% ± 15%	Explore
transit amplifying cell	6 studies	39% ± 16%	Explore
retinal ganglion cell	6 studies	60% ± 32%	Explore
hematopoietic stem cell	6 studies	52% ± 18%	Explore
lymphocyte	6 studies	38% ± 19%	Explore
precursor B cell	6 studies	47% ± 16%	Explore
retina horizontal cell	6 studies	44% ± 23%	Explore
cardiac muscle cell	6 studies	24% ± 7%	Explore
erythrocyte	6 studies	45% ± 18%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	46% ± 19%	Explore
hepatocyte	6 studies	64% ± 24%	Explore
interneuron	6 studies	52% ± 22%	Explore
exhausted T cell	5 studies	47% ± 14%	Explore
ionocyte	5 studies	41% ± 11%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	64% ± 18%	Explore
enteroendocrine cell	5 studies	62% ± 23%	Explore
intestinal crypt stem cell	5 studies	42% ± 17%	Explore
IgG plasma cell	5 studies	22% ± 7%	Explore
glial cell	5 studies	37% ± 25%	Explore
OFF-bipolar cell	5 studies	39% ± 27%	Explore
ON-bipolar cell	5 studies	46% ± 25%	Explore
pro-B cell	5 studies	50% ± 12%	Explore
brush cell	5 studies	34% ± 21%	Explore
neuroendocrine cell	5 studies	65% ± 17%	Explore
immature B cell	5 studies	45% ± 21%	Explore
amacrine cell	5 studies	48% ± 20%	Explore
mucus secreting cell	5 studies	25% ± 8%	Explore
Mueller cell	5 studies	35% ± 12%	Explore
granulocyte	5 studies	39% ± 15%	Explore
duct epithelial cell	4 studies	29% ± 6%	Explore
precursor cell	4 studies	46% ± 20%	Explore
pancreatic A cell	4 studies	75% ± 16%	Explore
type B pancreatic cell	4 studies	72% ± 17%	Explore
glomerular endothelial cell	4 studies	35% ± 10%	Explore
IgA plasma cell	4 studies	27% ± 8%	Explore
retinal bipolar neuron	4 studies	54% ± 28%	Explore
erythroblast	4 studies	51% ± 16%	Explore
Schwann cell	4 studies	38% ± 19%	Explore
retinal pigment epithelial cell	4 studies	52% ± 25%	Explore
adventitial cell	4 studies	37% ± 7%	Explore
endothelial cell of sinusoid	4 studies	27% ± 7%	Explore
muscle cell	4 studies	48% ± 15%	Explore
neutrophil	4 studies	25% ± 4%	Explore
germinal center B cell	4 studies	51% ± 14%	Explore
intermediate monocyte	4 studies	55% ± 18%	Explore
CD4-positive helper T cell	4 studies	28% ± 5%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	64% ± 4%	Explore
myoepithelial cell	4 studies	49% ± 16%	Explore
luminal cell of prostate epithelium	4 studies	44% ± 14%	Explore
keratinocyte	4 studies	35% ± 10%	Explore
T-helper 17 cell	4 studies	49% ± 21%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	39% ± 11%	Explore
double negative thymocyte	4 studies	53% ± 20%	Explore
deuterosomal cell	3 studies	52% ± 2%	Explore
hillock cell	3 studies	34% ± 10%	Explore
pancreatic D cell	3 studies	74% ± 19%	Explore
podocyte	3 studies	68% ± 16%	Explore
neural crest cell	3 studies	67% ± 11%	Explore
GABAergic interneuron	3 studies	24% ± 3%	Explore
renal principal cell	3 studies	52% ± 3%	Explore
thymocyte	3 studies	40% ± 28%	Explore
extravillous trophoblast	3 studies	68% ± 8%	Explore
placental villous trophoblast	3 studies	79% ± 8%	Explore
megakaryocyte	3 studies	28% ± 8%	Explore
serous secreting cell	3 studies	40% ± 0%	Explore
tissue-resident macrophage	3 studies	31% ± 9%	Explore
glycinergic amacrine cell	3 studies	27% ± 9%	Explore
rod bipolar cell	3 studies	59% ± 14%	Explore
acinar cell	3 studies	40% ± 18%	Explore
inflammatory macrophage	3 studies	43% ± 7%	Explore
pancreatic ductal cell	3 studies	63% ± 12%	Explore
granulocyte monocyte progenitor cell	3 studies	55% ± 29%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	62% ± 30%	Explore
group 3 innate lymphoid cell	3 studies	45% ± 16%	Explore
melanocyte	3 studies	37% ± 5%	Explore
T-helper 1 cell	3 studies	56% ± 12%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	43% ± 10%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	42% ± 14%	Explore
progenitor cell of mammary luminal epithelium	3 studies	54% ± 8%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	48% ± 16%	Explore
peripheral blood	19 studies	41% ± 14%	Explore
brain	18 studies	35% ± 16%	Explore
intestine	12 studies	40% ± 21%	Explore
eye	12 studies	37% ± 17%	Explore
kidney	9 studies	49% ± 13%	Explore
liver	7 studies	52% ± 18%	Explore
bone marrow	6 studies	30% ± 13%	Explore
lymph node	6 studies	45% ± 15%	Explore
heart	6 studies	22% ± 9%	Explore
pancreas	5 studies	58% ± 26%	Explore
uterus	5 studies	53% ± 20%	Explore
prostate	5 studies	35% ± 12%	Explore
placenta	4 studies	58% ± 23%	Explore
esophagus	4 studies	44% ± 30%	Explore
breast	4 studies	49% ± 5%	Explore
adipose	4 studies	31% ± 10%	Explore
adrenal gland	3 studies	43% ± 8%	Explore
skin	3 studies	31% ± 11%	Explore
thymus	3 studies	62% ± 21%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	6138.91	258 / 258	100%	106.63	230 / 230
esophagus	100%	3450.06	1445 / 1445	100%	49.13	183 / 183
kidney	100%	4055.91	89 / 89	100%	81.57	901 / 901
liver	100%	3238.60	226 / 226	100%	89.26	406 / 406
ovary	100%	4658.27	180 / 180	100%	66.37	430 / 430
prostate	100%	3505.35	245 / 245	100%	97.29	502 / 502
uterus	100%	3809.78	170 / 170	100%	96.05	459 / 459
brain	100%	3291.10	2639 / 2642	100%	86.06	705 / 705
thymus	100%	3534.87	653 / 653	100%	105.63	604 / 605
breast	100%	3886.22	459 / 459	100%	92.85	1115 / 1118
lung	100%	3057.37	576 / 578	100%	69.36	1155 / 1155
skin	100%	3112.03	1808 / 1809	99%	94.70	469 / 472
stomach	100%	3027.66	359 / 359	99%	60.23	284 / 286
pancreas	100%	1855.48	327 / 328	99%	67.40	177 / 178
bladder	100%	3515.71	21 / 21	99%	78.63	499 / 504
intestine	100%	3340.98	966 / 966	98%	72.37	518 / 527
adipose	100%	3761.14	1204 / 1204	0%	0	0 / 0
blood vessel	100%	3974.85	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	66.65	80 / 80
lymph node	0%	0	0 / 0	100%	102.10	29 / 29
spleen	100%	2852.51	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	82.71	45 / 45
ureter	0%	0	0 / 0	100%	35.62	1 / 1
muscle	99%	2150.58	797 / 803	0%	0	0 / 0
heart	97%	2371.75	839 / 861	0%	0	0 / 0
peripheral blood	68%	1809.66	635 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

IV. Literature review

[source]

Gene name	TBCA
Protein name	Tubulin-specific chaperone A Tubulin-specific chaperone A (TCP1-chaperonin cofactor A) (Tubulin-folding cofactor A) (CFA) Tubulin folding cofactor A
Synonyms	hCG_2016016
Description	FUNCTION: Tubulin-folding protein; involved in the early step of the tubulin folding pathway. FUNCTION: Tubulin-folding protein; involved in the early step of the tubulin folding pathway. . FUNCTION: Tubulin-folding protein; involved in the early step of the tubulin folding pathway. . FUNCTION: Tubulin-folding protein; involved in the early step of the tubulin folding pathway. . FUNCTION: Tubulin-folding protein; involved in the early step of the tubulin folding pathway. . FUNCTION: Tubulin-folding protein; involved in the early step of the tubulin folding pathway. . FUNCTION: Tubulin-folding protein; involved in the early step of the tubulin folding pathway. .
Accessions	E5RJM1 ENST00000522370.1 ENST00000518338.6 A0A494C144 E5RIX8 O75347 ENST00000651106.1 E5RHG6 ENST00000520361.5 ENST00000380377.9 [O75347-1] E5RJD8 ENST00000520039.1 ENST00000306388.10 [O75347-2] Q6FGD7 ENST00000517679.5 E5RIW3

GO_0006457	Biological process	protein folding
GO_0007023	Biological process	post-chaperonin tubulin folding pathway
GO_0007021	Biological process	tubulin complex assembly
GO_0005730	Cellular component	nucleolus
GO_0015630	Cellular component	microtubule cytoskeleton
GO_0005874	Cellular component	microtubule
GO_0005737	Cellular component	cytoplasm
GO_0015631	Molecular function	tubulin binding
GO_0051087	Molecular function	protein-folding chaperone binding
GO_0048487	Molecular function	beta-tubulin binding
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

TBCA report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review