Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 16 studies | 31% ± 12% | |
intestine | 10 studies | 34% ± 13% | |
kidney | 5 studies | 21% ± 3% | |
pancreas | 4 studies | 30% ± 10% | |
peripheral blood | 4 studies | 23% ± 4% | |
placenta | 4 studies | 48% ± 18% | |
uterus | 4 studies | 35% ± 18% | |
breast | 4 studies | 23% ± 6% | |
liver | 4 studies | 35% ± 20% | |
brain | 4 studies | 32% ± 7% | |
adipose | 4 studies | 31% ± 16% | |
eye | 3 studies | 21% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 23027.13 | 226 / 226 | 100% | 229.61 | 406 / 406 |
prostate | 100% | 14430.79 | 245 / 245 | 100% | 217.43 | 502 / 502 |
esophagus | 100% | 9439.27 | 1444 / 1445 | 100% | 203.04 | 183 / 183 |
skin | 100% | 14318.45 | 1806 / 1809 | 100% | 217.17 | 472 / 472 |
intestine | 100% | 14399.43 | 966 / 966 | 100% | 264.92 | 526 / 527 |
uterus | 100% | 11607.61 | 170 / 170 | 100% | 172.05 | 457 / 459 |
stomach | 100% | 15767.70 | 359 / 359 | 99% | 281.58 | 284 / 286 |
breast | 100% | 11264.63 | 459 / 459 | 99% | 174.73 | 1108 / 1118 |
thymus | 100% | 25308.82 | 653 / 653 | 99% | 331.32 | 599 / 605 |
pancreas | 100% | 45889.58 | 328 / 328 | 99% | 231.84 | 176 / 178 |
kidney | 100% | 11386.36 | 89 / 89 | 99% | 137.64 | 890 / 901 |
bladder | 100% | 11258.24 | 21 / 21 | 99% | 165.36 | 497 / 504 |
lung | 100% | 16654.26 | 578 / 578 | 98% | 176.77 | 1130 / 1155 |
ovary | 100% | 9186.78 | 180 / 180 | 97% | 130.42 | 417 / 430 |
adrenal gland | 100% | 13609.79 | 258 / 258 | 95% | 102.47 | 218 / 230 |
brain | 71% | 2976.27 | 1878 / 2642 | 84% | 58.49 | 592 / 705 |
adipose | 100% | 11679.15 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 252.22 | 80 / 80 |
spleen | 100% | 11850.80 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 117.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 85.63 | 1 / 1 |
blood vessel | 98% | 9450.50 | 1306 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 6869.29 | 826 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 83.07 | 25 / 29 |
peripheral blood | 76% | 3802.06 | 705 / 929 | 0% | 0 | 0 / 0 |
muscle | 42% | 1574.80 | 340 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0015031 | Biological process | protein transport |
GO_0001649 | Biological process | osteoblast differentiation |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005840 | Cellular component | ribosome |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RRBP1 |
Protein name | p180/ribosome receptor Ribosome-binding protein 1 (180 kDa ribosome receptor homolog) (RRp) (ES/130-related protein) (Ribosome receptor protein) RRBP1 protein Ribosome binding protein 1 |
Synonyms | KIAA1398 |
Description | FUNCTION: Acts as a ribosome receptor and mediates interaction between the ribosome and the endoplasmic reticulum membrane. . |
Accessions | A2A2S5 A0A087WU26 ENST00000470422.5 Q9P2E9 ENST00000246043.8 [Q9P2E9-1] A1A5C5 ENST00000377813.6 [Q9P2E9-1] A1A5C4 ENST00000398782.2 A7BI36 Q32NB1 F8W7S5 V9GY78 ENST00000360807.8 [Q9P2E9-3] ENST00000495501.2 ENST00000377807.6 [Q9P2E9-3] ENST00000455029.3 |