Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 3 studies | 25% ± 6% | |
glutamatergic neuron | 3 studies | 30% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 23% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1522.49 | 1445 / 1445 | 100% | 19.73 | 183 / 183 |
brain | 100% | 1329.86 | 2637 / 2642 | 100% | 25.24 | 705 / 705 |
prostate | 100% | 1703.89 | 245 / 245 | 100% | 14.76 | 501 / 502 |
breast | 100% | 1764.44 | 459 / 459 | 100% | 17.82 | 1114 / 1118 |
intestine | 100% | 1553.19 | 966 / 966 | 99% | 16.88 | 524 / 527 |
bladder | 100% | 1685.90 | 21 / 21 | 99% | 16.03 | 501 / 504 |
skin | 100% | 2303.61 | 1809 / 1809 | 99% | 38.90 | 469 / 472 |
uterus | 100% | 1857.11 | 170 / 170 | 99% | 16.06 | 456 / 459 |
stomach | 100% | 1305.78 | 359 / 359 | 99% | 17.15 | 284 / 286 |
lung | 100% | 1366.41 | 578 / 578 | 99% | 16.86 | 1146 / 1155 |
pancreas | 100% | 1109.59 | 328 / 328 | 99% | 11.05 | 176 / 178 |
thymus | 100% | 1537.91 | 653 / 653 | 99% | 10.52 | 597 / 605 |
ovary | 100% | 1610.85 | 180 / 180 | 97% | 11.72 | 416 / 430 |
kidney | 100% | 1123.18 | 89 / 89 | 93% | 12.34 | 837 / 901 |
liver | 100% | 1189.83 | 226 / 226 | 85% | 7.38 | 346 / 406 |
adrenal gland | 100% | 1637.52 | 258 / 258 | 82% | 6.68 | 189 / 230 |
adipose | 100% | 1705.86 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1247.86 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.44 | 29 / 29 |
muscle | 100% | 1350.58 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1773.98 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.89 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.08 | 1 / 1 |
heart | 98% | 816.62 | 847 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 14.78 | 77 / 80 |
peripheral blood | 54% | 1059.48 | 504 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006413 | Biological process | translational initiation |
GO_0032481 | Biological process | positive regulation of type I interferon production |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0051092 | Biological process | positive regulation of NF-kappaB transcription factor activity |
GO_1900227 | Biological process | positive regulation of NLRP3 inflammasome complex assembly |
GO_0045943 | Biological process | positive regulation of transcription by RNA polymerase I |
GO_0005730 | Cellular component | nucleolus |
GO_0072559 | Cellular component | NLRP3 inflammasome complex |
GO_0005622 | Cellular component | intracellular anatomical structure |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0004386 | Molecular function | helicase activity |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0003724 | Molecular function | RNA helicase activity |
GO_0003729 | Molecular function | mRNA binding |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
GO_0043023 | Molecular function | ribosomal large subunit binding |
GO_0000182 | Molecular function | rDNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0003725 | Molecular function | double-stranded RNA binding |
Gene name | DHX33 |
Protein name | ATP-dependent RNA helicase DHX33 (EC 3.6.4.13) (DEAH box protein 33) DEAH-box helicase 33 RNA helicase (EC 3.6.4.13) |
Synonyms | hCG_1985693 DDX33 |
Description | FUNCTION: Implicated in nucleolar organization, ribosome biogenesis, protein synthesis and cytoplasmic dsRNA sensing (By similarity) . Stimulates RNA polymerase I transcription of the 47S precursor rRNA. Associates with ribosomal DNA (rDNA) loci where it is involved in POLR1A recruitment . In the cytoplasm, promotes elongation-competent 80S ribosome assembly at the late stage of mRNA translation initiation . Senses cytosolic dsRNA mediating NLRP3 inflammasome formation in macrophages and type I interferon production in myeloid dendritic cells . Required for NLRP3 activation induced by viral dsRNA and bacterial RNA . In dendritic cells, required for induction of type I interferon production induced by cytoplasmic dsRNA via the activation of MAPK and NF-kappa-B signaling pathways (By similarity). . |
Accessions | Q05BE5 I3L1L6 I3L0M5 ENST00000572490.1 ENST00000574023.1 ENST00000225296.8 [Q9H6R0-1] ENST00000433302.7 Q9H6R0 |