Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 27% ± 9% | |
microglial cell | 6 studies | 22% ± 6% | |
oligodendrocyte | 6 studies | 25% ± 7% | |
regulatory T cell | 5 studies | 18% ± 2% | |
epithelial cell | 5 studies | 25% ± 8% | |
oligodendrocyte precursor cell | 5 studies | 30% ± 10% | |
naive B cell | 4 studies | 22% ± 4% | |
natural killer cell | 4 studies | 19% ± 4% | |
GABAergic neuron | 4 studies | 37% ± 13% | |
astrocyte | 4 studies | 33% ± 8% | |
glutamatergic neuron | 4 studies | 47% ± 13% | |
gamma-delta T cell | 4 studies | 19% ± 4% | |
effector CD8-positive, alpha-beta T cell | 3 studies | 18% ± 3% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 21% ± 3% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 21% ± 4% | |
mucosal invariant T cell | 3 studies | 19% ± 3% | |
ciliated cell | 3 studies | 22% ± 7% | |
goblet cell | 3 studies | 19% ± 2% | |
pericyte | 3 studies | 16% ± 0% | |
interneuron | 3 studies | 44% ± 17% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 34% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1599.31 | 1445 / 1445 | 100% | 11.08 | 183 / 183 |
ovary | 100% | 2153.25 | 180 / 180 | 100% | 10.78 | 430 / 430 |
prostate | 100% | 1620.06 | 245 / 245 | 100% | 12.97 | 502 / 502 |
breast | 100% | 2045.22 | 459 / 459 | 100% | 14.70 | 1117 / 1118 |
lung | 100% | 1664.71 | 577 / 578 | 100% | 10.96 | 1155 / 1155 |
thymus | 100% | 1938.18 | 653 / 653 | 100% | 13.32 | 603 / 605 |
uterus | 100% | 2130.49 | 170 / 170 | 100% | 12.64 | 457 / 459 |
brain | 99% | 1129.95 | 2619 / 2642 | 100% | 10.65 | 705 / 705 |
kidney | 100% | 1129.26 | 89 / 89 | 99% | 10.12 | 892 / 901 |
bladder | 100% | 1944.10 | 21 / 21 | 99% | 10.84 | 498 / 504 |
liver | 100% | 867.16 | 226 / 226 | 98% | 6.49 | 399 / 406 |
adrenal gland | 100% | 1267.81 | 258 / 258 | 98% | 8.03 | 226 / 230 |
pancreas | 99% | 821.94 | 325 / 328 | 99% | 10.36 | 176 / 178 |
stomach | 100% | 1260.09 | 359 / 359 | 98% | 9.97 | 280 / 286 |
intestine | 100% | 1811.61 | 966 / 966 | 97% | 10.78 | 513 / 527 |
skin | 100% | 2216.59 | 1808 / 1809 | 94% | 9.02 | 442 / 472 |
adipose | 100% | 2090.18 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2344.55 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.96 | 29 / 29 |
muscle | 100% | 1376.22 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1384.36 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.85 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.45 | 1 / 1 |
heart | 96% | 1058.41 | 823 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 1440.96 | 773 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 75% | 4.43 | 60 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016607 | Cellular component | nuclear speck |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RBM27 |
Protein name | RBM27 protein RNA-binding protein 27 (RNA-binding motif protein 27) |
Synonyms | KIAA1311 |
Description | FUNCTION: May be involved in the turnover of nuclear polyadenylated (pA+) RNA. . |
Accessions | Q9P2N5 ENST00000265271.7 Q05DK9 |