Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 19 studies | 36% ± 19% | |
lung | 15 studies | 27% ± 11% | |
peripheral blood | 11 studies | 20% ± 6% | |
eye | 8 studies | 25% ± 10% | |
kidney | 5 studies | 23% ± 7% | |
heart | 5 studies | 22% ± 3% | |
adipose | 5 studies | 26% ± 9% | |
liver | 5 studies | 36% ± 19% | |
intestine | 5 studies | 21% ± 7% | |
bone marrow | 4 studies | 24% ± 11% | |
pancreas | 3 studies | 58% ± 27% | |
placenta | 3 studies | 32% ± 16% | |
uterus | 3 studies | 29% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 14408.51 | 459 / 459 | 100% | 241.06 | 1118 / 1118 |
esophagus | 100% | 14596.03 | 1445 / 1445 | 100% | 169.75 | 183 / 183 |
lung | 100% | 16767.66 | 578 / 578 | 100% | 143.59 | 1155 / 1155 |
brain | 100% | 18987.01 | 2635 / 2642 | 100% | 143.13 | 705 / 705 |
stomach | 100% | 12318.74 | 359 / 359 | 100% | 123.61 | 285 / 286 |
intestine | 100% | 16185.88 | 966 / 966 | 100% | 116.86 | 525 / 527 |
uterus | 100% | 14043.53 | 170 / 170 | 100% | 108.48 | 457 / 459 |
ovary | 100% | 12253.23 | 180 / 180 | 100% | 69.08 | 428 / 430 |
bladder | 100% | 15690.48 | 21 / 21 | 99% | 120.86 | 501 / 504 |
prostate | 100% | 12870.98 | 244 / 245 | 100% | 144.13 | 500 / 502 |
thymus | 100% | 16150.74 | 653 / 653 | 99% | 120.73 | 599 / 605 |
liver | 100% | 9900.31 | 226 / 226 | 99% | 82.54 | 401 / 406 |
kidney | 100% | 15233.85 | 89 / 89 | 99% | 118.08 | 888 / 901 |
skin | 100% | 21321.77 | 1808 / 1809 | 98% | 155.47 | 462 / 472 |
pancreas | 98% | 7458.85 | 321 / 328 | 99% | 104.47 | 176 / 178 |
adrenal gland | 100% | 22472.62 | 258 / 258 | 95% | 102.83 | 219 / 230 |
adipose | 100% | 16586.17 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 19462.59 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 84.11 | 29 / 29 |
spleen | 100% | 13457.55 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 103.32 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 45.17 | 1 / 1 |
muscle | 100% | 8759.44 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 93% | 9660.84 | 805 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 74.73 | 74 / 80 |
peripheral blood | 88% | 11867.00 | 817 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031623 | Biological process | receptor internalization |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0006898 | Biological process | receptor-mediated endocytosis |
GO_0001649 | Biological process | osteoblast differentiation |
GO_0006886 | Biological process | intracellular protein transport |
GO_0051301 | Biological process | cell division |
GO_0072318 | Biological process | clathrin coat disassembly |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_0048268 | Biological process | clathrin coat assembly |
GO_0150093 | Biological process | amyloid-beta clearance by transcytosis |
GO_0033572 | Biological process | transferrin transport |
GO_0006914 | Biological process | autophagy |
GO_0060236 | Biological process | regulation of mitotic spindle organization |
GO_0072583 | Biological process | clathrin-dependent endocytosis |
GO_1900126 | Biological process | negative regulation of hyaluronan biosynthetic process |
GO_1903077 | Biological process | negative regulation of protein localization to plasma membrane |
GO_1990498 | Cellular component | mitotic spindle microtubule |
GO_0005886 | Cellular component | plasma membrane |
GO_0072686 | Cellular component | mitotic spindle |
GO_0016020 | Cellular component | membrane |
GO_0030118 | Cellular component | clathrin coat |
GO_0005764 | Cellular component | lysosome |
GO_0032991 | Cellular component | protein-containing complex |
GO_1903561 | Cellular component | extracellular vesicle |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030136 | Cellular component | clathrin-coated vesicle |
GO_0030669 | Cellular component | clathrin-coated endocytic vesicle membrane |
GO_0071439 | Cellular component | clathrin complex |
GO_0005925 | Cellular component | focal adhesion |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0030130 | Cellular component | clathrin coat of trans-Golgi network vesicle |
GO_0005829 | Cellular component | cytosol |
GO_0030132 | Cellular component | clathrin coat of coated pit |
GO_0045334 | Cellular component | clathrin-coated endocytic vesicle |
GO_0005768 | Cellular component | endosome |
GO_0042470 | Cellular component | melanosome |
GO_0005819 | Cellular component | spindle |
GO_0036020 | Cellular component | endolysosome membrane |
GO_0032051 | Molecular function | clathrin light chain binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0005198 | Molecular function | structural molecule activity |
GO_0050750 | Molecular function | low-density lipoprotein particle receptor binding |
GO_0003723 | Molecular function | RNA binding |
GO_0097718 | Molecular function | disordered domain specific binding |
GO_0005515 | Molecular function | protein binding |
GO_1990381 | Molecular function | ubiquitin-specific protease binding |
GO_0003725 | Molecular function | double-stranded RNA binding |
Gene name | CLTC |
Protein name | CLTC protein Clathrin heavy chain 1 (Clathrin heavy chain on chromosome 17) (CLH-17) Clathrin heavy chain |
Synonyms | hCG_1818599 CLH17 KIAA0034 CLTCL2 |
Description | FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. Two different adapter protein complexes link the clathrin lattice either to the plasma membrane or to the trans-Golgi network. Acts as a component of the TACC3/ch-TOG/clathrin complex proposed to contribute to stabilization of kinetochore fibers of the mitotic spindle by acting as inter-microtubule bridge . The TACC3/ch-TOG/clathrin complex is required for the maintenance of kinetochore fiber tension . Plays a role in early autophagosome formation . Interaction with DNAJC6 mediates the recruitment of HSPA8 to the clathrin lattice and creates local destabilization of the lattice promoting uncoating (By similarity). . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . |
Accessions | A0A8V8TRE8 ENST00000700710.1 K7EJJ5 ENST00000700709.1 ENST00000472651.6 A0A8V8TQK3 A0A8V8TQ18 A0A087WVQ6 ENST00000475458.2 ENST00000700714.1 A0A8V8TQK7 ENST00000580081.2 J3KS13 ENST00000700712.1 ENST00000700711.1 J3KTN1 A0A8V8TQK1 ENST00000579456.5 Q49AL0 ENST00000269122.8 [Q00610-1] ENST00000584313.5 ENST00000483176.2 ENST00000700713.1 ENST00000700715.1 A0A8V8TR47 ENST00000700707.1 [Q00610-1] Q00610 J3QL20 J3KRF5 ENST00000700708.1 A0A8V8TQ14 A0A8V8TRF0 ENST00000393043.5 [Q00610-2] |