Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 21 studies | 94% ± 8% | |
lung | 20 studies | 85% ± 18% | |
brain | 17 studies | 44% ± 23% | |
intestine | 13 studies | 90% ± 15% | |
eye | 11 studies | 62% ± 24% | |
kidney | 9 studies | 85% ± 20% | |
liver | 8 studies | 77% ± 21% | |
bone marrow | 6 studies | 86% ± 19% | |
lymph node | 6 studies | 98% ± 2% | |
placenta | 5 studies | 71% ± 36% | |
heart | 5 studies | 37% ± 17% | |
uterus | 5 studies | 94% ± 9% | |
prostate | 5 studies | 70% ± 37% | |
pancreas | 4 studies | 81% ± 24% | |
adipose | 4 studies | 55% ± 26% | |
esophagus | 4 studies | 72% ± 23% | |
breast | 4 studies | 97% ± 3% | |
adrenal gland | 3 studies | 80% ± 23% | |
skin | 3 studies | 83% ± 17% | |
stomach | 3 studies | 74% ± 11% | |
thymus | 3 studies | 86% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 100138.05 | 21 / 21 | 100% | 667.36 | 504 / 504 |
esophagus | 100% | 91983.05 | 1445 / 1445 | 100% | 437.39 | 183 / 183 |
pancreas | 100% | 97454.20 | 328 / 328 | 100% | 676.02 | 178 / 178 |
prostate | 100% | 96282.67 | 245 / 245 | 100% | 767.45 | 502 / 502 |
stomach | 100% | 71409.93 | 359 / 359 | 100% | 650.79 | 286 / 286 |
thymus | 100% | 84658.50 | 653 / 653 | 100% | 964.92 | 605 / 605 |
uterus | 100% | 104341.50 | 170 / 170 | 100% | 582.84 | 459 / 459 |
lung | 100% | 92471.68 | 577 / 578 | 100% | 561.33 | 1155 / 1155 |
liver | 100% | 57343.35 | 226 / 226 | 100% | 436.48 | 405 / 406 |
kidney | 100% | 107205.15 | 89 / 89 | 100% | 740.99 | 898 / 901 |
intestine | 100% | 91527.17 | 966 / 966 | 100% | 840.97 | 525 / 527 |
adrenal gland | 100% | 84479.39 | 258 / 258 | 100% | 392.50 | 229 / 230 |
ovary | 100% | 163770.28 | 180 / 180 | 100% | 540.04 | 428 / 430 |
breast | 100% | 111095.90 | 459 / 459 | 99% | 553.33 | 1111 / 1118 |
skin | 100% | 89327.85 | 1807 / 1809 | 99% | 502.21 | 467 / 472 |
brain | 95% | 38034.17 | 2510 / 2642 | 99% | 359.17 | 700 / 705 |
adipose | 100% | 127064.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 95409.91 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 795.37 | 29 / 29 |
muscle | 100% | 276629.79 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 78388.05 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 380.34 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 263.73 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 577.26 | 79 / 80 |
heart | 98% | 72568.93 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 58496.48 | 815 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0009615 | Biological process | response to virus |
GO_0042981 | Biological process | regulation of apoptotic process |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0006816 | Biological process | calcium ion transport |
GO_1902230 | Biological process | negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage |
GO_0005615 | Cellular component | extracellular space |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005881 | Cellular component | cytoplasmic microtubule |
GO_0000922 | Cellular component | spindle pole |
GO_0005771 | Cellular component | multivesicular body |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | TPT1 |
Protein name | Translationally-controlled tumor protein (TCTP) (Fortilin) (Histamine-releasing factor) (HRF) (p23) Translationally-controlled tumor protein |
Synonyms | hCG_32792 |
Description | FUNCTION: Involved in calcium binding and microtubule stabilization . Acts as a negative regulator of TSC22D1-mediated apoptosis, via interaction with and destabilization of TSC22D1 protein . . |
Accessions | H0YCX0 ENST00000379056.5 [P13693-2] ENST00000616577.4 ENST00000379055.5 [P13693-2] ENST00000530705.6 [P13693-1] P13693 Q5W0H4 ENST00000530245.5 ENST00000379060.8 A0A0B4J2C3 J3KPG2 ENST00000528619.5 E9PJF7 ENST00000309246.9 ENST00000527226.2 |