I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 28% ± 11% | |
| dendritic cell | 3 studies | 22% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 28% ± 11% | |
| dendritic cell | 3 studies | 22% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| liver | 3 studies | 22% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2462.06 | 1444 / 1445 | 100% | 30.29 | 183 / 183 |
| breast | 100% | 2036.38 | 459 / 459 | 100% | 29.87 | 1115 / 1118 |
| intestine | 100% | 1908.39 | 965 / 966 | 100% | 27.30 | 526 / 527 |
| prostate | 100% | 1736.16 | 245 / 245 | 100% | 21.65 | 500 / 502 |
| pancreas | 100% | 1429.84 | 328 / 328 | 99% | 16.67 | 177 / 178 |
| bladder | 100% | 2282.33 | 21 / 21 | 99% | 25.23 | 501 / 504 |
| stomach | 100% | 1615.93 | 358 / 359 | 100% | 26.37 | 285 / 286 |
| skin | 100% | 3493.88 | 1809 / 1809 | 99% | 36.03 | 468 / 472 |
| uterus | 100% | 2013.66 | 170 / 170 | 99% | 26.57 | 455 / 459 |
| brain | 99% | 1252.74 | 2618 / 2642 | 100% | 27.15 | 705 / 705 |
| lung | 99% | 1555.09 | 573 / 578 | 100% | 26.54 | 1154 / 1155 |
| thymus | 100% | 1508.58 | 652 / 653 | 99% | 16.03 | 598 / 605 |
| kidney | 100% | 1172.65 | 89 / 89 | 98% | 22.89 | 880 / 901 |
| ovary | 100% | 1862.89 | 180 / 180 | 97% | 17.63 | 419 / 430 |
| adrenal gland | 100% | 1723.72 | 258 / 258 | 89% | 10.78 | 204 / 230 |
| liver | 98% | 1002.55 | 222 / 226 | 81% | 10.16 | 330 / 406 |
| adipose | 100% | 2169.05 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 26.48 | 29 / 29 |
| muscle | 100% | 4257.89 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1472.63 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 30.80 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 6.17 | 1 / 1 |
| blood vessel | 100% | 1727.76 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 95% | 20.26 | 76 / 80 |
| heart | 93% | 1399.76 | 802 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 42% | 1388.18 | 389 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0000479 | Biological process | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0000462 | Biological process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0030688 | Cellular component | preribosome, small subunit precursor |
| GO_0034511 | Molecular function | U3 snoRNA binding |
| GO_0005525 | Molecular function | GTP binding |
| GO_0003924 | Molecular function | GTPase activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | TSR1 |
| Protein name | Pre-rRNA-processing protein TSR1 homolog Alternative protein TSR1 TSR1 ribosome maturation factor |
| Synonyms | KIAA1401 |
| Description | FUNCTION: Required during maturation of the 40S ribosomal subunit in the nucleolus. . |
| Accessions | L8EAY9 Q2NL82 ENST00000575049.1 ENST00000571806.1 ENST00000576112.2 I3L1Q5 ENST00000301364.10 I3L4T0 I3L4E8 |
