Name | Number of supported studies | Average coverage | |
---|---|---|---|
microglial cell | 3 studies | 19% ± 2% | |
macrophage | 3 studies | 25% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1540.70 | 1444 / 1445 | 100% | 32.14 | 183 / 183 |
uterus | 100% | 2340.17 | 170 / 170 | 100% | 23.95 | 458 / 459 |
ovary | 100% | 2597.47 | 180 / 180 | 100% | 25.53 | 429 / 430 |
intestine | 100% | 1573.51 | 966 / 966 | 100% | 23.09 | 525 / 527 |
prostate | 100% | 2418.16 | 245 / 245 | 100% | 15.55 | 500 / 502 |
breast | 100% | 1748.70 | 459 / 459 | 100% | 20.76 | 1113 / 1118 |
thymus | 100% | 2487.34 | 653 / 653 | 99% | 16.22 | 601 / 605 |
skin | 100% | 1976.52 | 1808 / 1809 | 99% | 22.70 | 469 / 472 |
bladder | 100% | 2102.43 | 21 / 21 | 99% | 23.54 | 500 / 504 |
lung | 100% | 2393.30 | 576 / 578 | 99% | 19.81 | 1142 / 1155 |
stomach | 99% | 1215.77 | 357 / 359 | 99% | 25.08 | 283 / 286 |
pancreas | 99% | 1079.75 | 325 / 328 | 99% | 15.26 | 176 / 178 |
brain | 99% | 1287.46 | 2609 / 2642 | 99% | 12.98 | 696 / 705 |
adrenal gland | 100% | 1755.18 | 258 / 258 | 97% | 10.57 | 223 / 230 |
kidney | 100% | 1720.85 | 89 / 89 | 96% | 11.39 | 866 / 901 |
liver | 100% | 1535.94 | 226 / 226 | 96% | 13.23 | 389 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 18.65 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.77 | 29 / 29 |
peripheral blood | 100% | 10114.60 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 3520.75 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.43 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.19 | 1 / 1 |
adipose | 100% | 1407.02 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1315.89 | 1330 / 1335 | 0% | 0 | 0 / 0 |
muscle | 96% | 1040.69 | 770 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 939.77 | 815 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042327 | Biological process | positive regulation of phosphorylation |
GO_2000623 | Biological process | negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
GO_0000956 | Biological process | nuclear-transcribed mRNA catabolic process |
GO_0000184 | Biological process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
GO_0005622 | Cellular component | intracellular anatomical structure |
GO_0016020 | Cellular component | membrane |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0004386 | Molecular function | helicase activity |
GO_0005515 | Molecular function | protein binding |
GO_0003724 | Molecular function | RNA helicase activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DHX34 |
Protein name | DExH-box helicase 34 Probable ATP-dependent RNA helicase DHX34 (EC 3.6.4.13) (DEAH box protein 34) (DExH-box helicase 34) |
Synonyms | DDX34 KIAA0134 |
Description | FUNCTION: Probable ATP-binding RNA helicase required for nonsense-mediated decay (NMD) degradation of mRNA transcripts containing premature stop codons . Promotes the phosphorylation of UPF1 along with its interaction with key NMD pathway proteins UPF2 and EIF4A3 . Interaction with the RUVBL1-RUVBL2 complex results in loss of nucleotide binding ability and ATP hydrolysis of the complex . Negatively regulates the nucleotide binding ability and ATP hydrolysis of the RUVBL1-RUVBL2 complex via induction of N-terminus conformation changes of the RUVBL2 subunits . . |
Accessions | ENST00000460681.1 H7C504 Q14147 ENST00000328771.9 |