Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 879.09 | 1445 / 1445 | 100% | 43.41 | 183 / 183 |
ovary | 100% | 670.27 | 180 / 180 | 100% | 62.02 | 430 / 430 |
uterus | 100% | 716.50 | 170 / 170 | 100% | 63.68 | 459 / 459 |
breast | 100% | 891.20 | 459 / 459 | 100% | 61.35 | 1117 / 1118 |
bladder | 100% | 730.71 | 21 / 21 | 100% | 55.04 | 503 / 504 |
liver | 100% | 842.77 | 226 / 226 | 100% | 32.25 | 405 / 406 |
intestine | 100% | 890.16 | 966 / 966 | 99% | 53.89 | 522 / 527 |
thymus | 100% | 605.46 | 651 / 653 | 99% | 33.30 | 600 / 605 |
stomach | 100% | 785.48 | 358 / 359 | 99% | 46.95 | 283 / 286 |
brain | 99% | 651.35 | 2606 / 2642 | 100% | 45.34 | 705 / 705 |
prostate | 99% | 556.60 | 243 / 245 | 99% | 40.86 | 499 / 502 |
kidney | 100% | 681.83 | 89 / 89 | 98% | 30.41 | 887 / 901 |
lung | 97% | 612.70 | 562 / 578 | 100% | 52.21 | 1155 / 1155 |
skin | 100% | 1199.14 | 1809 / 1809 | 97% | 45.73 | 456 / 472 |
adrenal gland | 100% | 1225.72 | 258 / 258 | 97% | 28.27 | 222 / 230 |
pancreas | 96% | 397.85 | 315 / 328 | 99% | 33.74 | 177 / 178 |
adipose | 100% | 943.99 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 59.07 | 29 / 29 |
muscle | 100% | 1282.82 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1028.41 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 68.96 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 29.95 | 1 / 1 |
blood vessel | 98% | 595.98 | 1309 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 834.88 | 830 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 15.98 | 58 / 80 |
peripheral blood | 65% | 644.16 | 608 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006397 | Biological process | mRNA processing |
GO_1990180 | Biological process | mitochondrial tRNA 3'-end processing |
GO_0070901 | Biological process | mitochondrial tRNA methylation |
GO_0000964 | Biological process | mitochondrial RNA 5'-end processing |
GO_0090646 | Biological process | mitochondrial tRNA processing |
GO_0097745 | Biological process | mitochondrial tRNA 5'-end processing |
GO_0070131 | Biological process | positive regulation of mitochondrial translation |
GO_0042645 | Cellular component | mitochondrial nucleoid |
GO_0005739 | Cellular component | mitochondrion |
GO_0043527 | Cellular component | tRNA methyltransferase complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0030678 | Cellular component | mitochondrial ribonuclease P complex |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005634 | Cellular component | nucleus |
GO_0160106 | Molecular function | tRNA (adenine(9)-N1)-methyltransferase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0052905 | Molecular function | tRNA (guanosine(9)-N1)-methyltransferase activity |
GO_0003723 | Molecular function | RNA binding |
GO_0000049 | Molecular function | tRNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TRMT10C |
Protein name | tRNA (guanine(9)-N(1))-methyltransferase (EC 2.1.1.221) tRNA methyltransferase 10 homolog C (HBV pre-S2 trans-regulated protein 2) (Mitochondrial ribonuclease P protein 1) (Mitochondrial RNase P protein 1) (RNA (guanine-9-)-methyltransferase domain-containing protein 1) (Renal carcinoma antigen NY-REN-49) (mRNA methyladenosine-N(1)-methyltransferase) (EC 2.1.1.-) (tRNA (adenine(9)-N(1))-methyltransferase) (EC 2.1.1.218) (tRNA (guanine(9)-N(1))-methyltransferase) (EC 2.1.1.221) |
Synonyms | MRPP1 RG9MTD1 |
Description | FUNCTION: Mitochondrial tRNA N(1)-methyltransferase involved in mitochondrial tRNA maturation . Component of mitochondrial ribonuclease P, a complex composed of TRMT10C/MRPP1, HSD17B10/MRPP2 and PRORP/MRPP3, which cleaves tRNA molecules in their 5'-ends . Together with HSD17B10/MRPP2, forms a subcomplex of the mitochondrial ribonuclease P, named MRPP1-MRPP2 subcomplex, which displays functions that are independent of the ribonuclease P activity . The MRPP1-MRPP2 subcomplex catalyzes the formation of N(1)-methylguanine and N(1)-methyladenine at position 9 (m1G9 and m1A9, respectively) in tRNAs; TRMT10C/MRPP1 acting as the catalytic N(1)-methyltransferase subunit . The MRPP1-MRPP2 subcomplex also acts as a tRNA maturation platform: following 5'-end cleavage by the mitochondrial ribonuclease P complex, the MRPP1-MRPP2 subcomplex enhances the efficiency of 3'-processing catalyzed by ELAC2, retains the tRNA product after ELAC2 processing and presents the nascent tRNA to the mitochondrial CCA tRNA nucleotidyltransferase TRNT1 enzyme . In addition to tRNA N(1)-methyltransferase activity, TRMT10C/MRPP1 also acts as a mRNA N(1)-methyltransferase by mediating methylation of adenosine residues at the N(1) position of MT-ND5 mRNA . Associates with mitochondrial DNA complexes at the nucleoids to initiate RNA processing and ribosome assembly. . |
Accessions | ENST00000495642.1 ENST00000309922.7 C9JVB6 Q7L0Y3 |