Name | Number of supported studies | Average coverage | |
---|---|---|---|
adipocyte | 7 studies | 30% ± 10% | |
epithelial cell | 6 studies | 36% ± 15% | |
hematopoietic precursor cell | 5 studies | 26% ± 7% | |
naive B cell | 5 studies | 16% ± 1% | |
classical monocyte | 4 studies | 23% ± 6% | |
endothelial cell | 4 studies | 23% ± 3% | |
precursor B cell | 4 studies | 20% ± 2% | |
myeloid cell | 4 studies | 26% ± 3% | |
dendritic cell | 4 studies | 32% ± 13% | |
conventional dendritic cell | 3 studies | 45% ± 8% | |
non-classical monocyte | 3 studies | 25% ± 7% | |
basal cell | 3 studies | 21% ± 3% | |
pro-B cell | 3 studies | 30% ± 13% | |
retinal cone cell | 3 studies | 23% ± 5% | |
GABAergic neuron | 3 studies | 36% ± 1% | |
astrocyte | 3 studies | 26% ± 3% | |
glutamatergic neuron | 3 studies | 43% ± 5% | |
transit amplifying cell | 3 studies | 26% ± 3% | |
plasmacytoid dendritic cell | 3 studies | 22% ± 3% | |
erythroblast | 3 studies | 33% ± 13% | |
natural killer cell | 3 studies | 19% ± 5% | |
CD4-positive, alpha-beta T cell | 3 studies | 19% ± 2% | |
regulatory T cell | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 10911.17 | 1445 / 1445 | 100% | 115.23 | 183 / 183 |
intestine | 100% | 11506.71 | 966 / 966 | 100% | 101.78 | 527 / 527 |
ovary | 100% | 7188.20 | 180 / 180 | 100% | 99.14 | 430 / 430 |
prostate | 100% | 7619.35 | 245 / 245 | 100% | 78.24 | 502 / 502 |
stomach | 100% | 8476.29 | 359 / 359 | 100% | 102.65 | 286 / 286 |
breast | 100% | 11272.99 | 459 / 459 | 100% | 97.15 | 1116 / 1118 |
skin | 100% | 11461.40 | 1809 / 1809 | 100% | 95.28 | 471 / 472 |
kidney | 100% | 8792.11 | 89 / 89 | 100% | 81.22 | 899 / 901 |
bladder | 100% | 9026.67 | 21 / 21 | 100% | 81.04 | 502 / 504 |
lung | 100% | 9087.61 | 576 / 578 | 100% | 88.19 | 1154 / 1155 |
uterus | 100% | 8240.96 | 170 / 170 | 100% | 78.08 | 457 / 459 |
thymus | 100% | 7591.82 | 652 / 653 | 99% | 57.55 | 601 / 605 |
adrenal gland | 100% | 15217.91 | 258 / 258 | 99% | 81.46 | 228 / 230 |
pancreas | 98% | 5988.13 | 321 / 328 | 100% | 57.08 | 178 / 178 |
brain | 97% | 7317.41 | 2575 / 2642 | 100% | 83.54 | 705 / 705 |
liver | 99% | 4314.45 | 224 / 226 | 95% | 42.11 | 385 / 406 |
adipose | 100% | 13064.99 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 114.34 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 86.92 | 29 / 29 |
muscle | 100% | 29213.44 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 7564.76 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 92.98 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.72 | 1 / 1 |
blood vessel | 100% | 7662.00 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 22709.58 | 844 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 87% | 6046.63 | 812 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0006101 | Biological process | citrate metabolic process |
GO_0006099 | Biological process | tricarboxylic acid cycle |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0005634 | Cellular component | nucleus |
GO_0003723 | Molecular function | RNA binding |
GO_0004108 | Molecular function | citrate (Si)-synthase activity |
Gene name | CS |
Protein name | Citrate synthase, mitochondrial (EC 2.3.3.1) (Citrate (Si)-synthase) Citrate synthase |
Synonyms | |
Description | |
Accessions | ENST00000549143.5 ENST00000548746.5 F8VX07 ENST00000546891.5 F8VTT8 O75390 ENST00000551137.5 F8VR34 F8W4S1 ENST00000351328.8 F8VRI6 F8VX68 ENST00000549221.5 H0YH82 F8W1S4 ENST00000550655.5 F8VPA1 F8VRP1 F8VZK9 A0A0C4DGI3 ENST00000548041.5 ENST00000551473.5 F8VPF9 ENST00000551253.5 F8VU34 F8W0J2 ENST00000550159.5 Q0QEL2 B4DJV2 ENST00000546930.5 ENST00000550734.5 ENST00000547298.5 F8VWQ5 F8W642 ENST00000551430.6 H0YIC4 ENST00000552222.5 ENST00000552688.5 ENST00000548567.5 ENST00000551968.5 F8VVY4 ENST00000542324.6 ENST00000551936.5 ENST00000548849.5 |