Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 5 studies | 26% ± 8% | |
epithelial cell | 4 studies | 19% ± 3% | |
glutamatergic neuron | 4 studies | 32% ± 9% | |
astrocyte | 4 studies | 19% ± 3% | |
microglial cell | 3 studies | 18% ± 1% | |
oligodendrocyte | 3 studies | 17% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 28% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1344.27 | 1445 / 1445 | 100% | 26.70 | 183 / 183 |
intestine | 100% | 1426.19 | 966 / 966 | 100% | 20.89 | 527 / 527 |
lung | 100% | 1506.16 | 578 / 578 | 100% | 19.90 | 1155 / 1155 |
breast | 100% | 1084.78 | 459 / 459 | 100% | 21.06 | 1115 / 1118 |
stomach | 100% | 1076.19 | 359 / 359 | 100% | 21.55 | 285 / 286 |
bladder | 100% | 1094.71 | 21 / 21 | 100% | 16.88 | 502 / 504 |
prostate | 100% | 1241.75 | 245 / 245 | 100% | 14.05 | 500 / 502 |
skin | 100% | 1676.24 | 1809 / 1809 | 99% | 23.63 | 469 / 472 |
ovary | 100% | 1189.73 | 180 / 180 | 99% | 10.86 | 424 / 430 |
pancreas | 100% | 962.77 | 328 / 328 | 98% | 11.85 | 175 / 178 |
uterus | 100% | 1176.18 | 170 / 170 | 98% | 16.32 | 451 / 459 |
brain | 98% | 912.89 | 2601 / 2642 | 100% | 13.09 | 702 / 705 |
thymus | 100% | 1250.25 | 653 / 653 | 97% | 10.35 | 587 / 605 |
kidney | 100% | 947.93 | 89 / 89 | 96% | 9.38 | 865 / 901 |
liver | 100% | 848.12 | 226 / 226 | 83% | 6.84 | 339 / 406 |
adrenal gland | 100% | 859.16 | 258 / 258 | 75% | 4.63 | 172 / 230 |
adipose | 100% | 1095.90 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.78 | 29 / 29 |
spleen | 100% | 1758.33 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.66 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.65 | 1 / 1 |
muscle | 100% | 880.74 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 809.17 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 668.60 | 836 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 11.56 | 77 / 80 |
peripheral blood | 86% | 1215.45 | 800 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0001917 | Cellular component | photoreceptor inner segment |
GO_0000785 | Cellular component | chromatin |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046983 | Molecular function | protein dimerization activity |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | ZBED4 |
Protein name | Zinc finger BED domain-containing protein 4 |
Synonyms | KIAA0637 |
Description | FUNCTION: Transcriptional regulator that binds to poly-guanine tracts in gene promoters and activates transcription (By similarity). Able to bind single- and double-stranded DNA and RNA (By similarity). . |
Accessions | O75132 ENST00000216268.6 |