Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 22% ± 5% | |
dendritic cell | 3 studies | 22% ± 6% |
Insufficient scRNA-seq data for expression of RRS1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 896.93 | 1445 / 1445 | 100% | 46.81 | 183 / 183 |
skin | 100% | 1285.20 | 1809 / 1809 | 100% | 63.91 | 471 / 472 |
intestine | 100% | 880.62 | 964 / 966 | 100% | 68.72 | 526 / 527 |
ovary | 100% | 1004.11 | 180 / 180 | 100% | 44.57 | 428 / 430 |
stomach | 99% | 900.05 | 357 / 359 | 100% | 63.32 | 286 / 286 |
uterus | 100% | 1023.79 | 170 / 170 | 99% | 49.12 | 456 / 459 |
bladder | 100% | 1146.76 | 21 / 21 | 99% | 62.26 | 500 / 504 |
pancreas | 100% | 1377.15 | 328 / 328 | 99% | 34.26 | 176 / 178 |
brain | 99% | 587.76 | 2628 / 2642 | 99% | 33.46 | 700 / 705 |
breast | 100% | 899.47 | 459 / 459 | 99% | 48.94 | 1104 / 1118 |
prostate | 100% | 689.87 | 244 / 245 | 99% | 41.80 | 497 / 502 |
thymus | 100% | 549.31 | 650 / 653 | 99% | 27.11 | 598 / 605 |
lung | 97% | 632.26 | 563 / 578 | 99% | 43.06 | 1143 / 1155 |
adrenal gland | 100% | 840.46 | 258 / 258 | 94% | 26.65 | 217 / 230 |
kidney | 99% | 506.42 | 88 / 89 | 93% | 20.93 | 842 / 901 |
liver | 83% | 469.61 | 187 / 226 | 94% | 34.80 | 382 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 95.52 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 56.05 | 29 / 29 |
muscle | 100% | 1781.98 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 783.63 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 39.22 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 103.34 | 1 / 1 |
adipose | 100% | 971.02 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 697.02 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 94% | 608.54 | 806 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 70% | 449.84 | 652 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000447 | Biological process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
GO_0002244 | Biological process | hematopoietic progenitor cell differentiation |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_1902570 | Biological process | protein localization to nucleolus |
GO_0000027 | Biological process | ribosomal large subunit assembly |
GO_0007080 | Biological process | mitotic metaphase chromosome alignment |
GO_1901796 | Biological process | regulation of signal transduction by p53 class mediator |
GO_0030687 | Cellular component | preribosome, large subunit precursor |
GO_0005730 | Cellular component | nucleolus |
GO_0000794 | Cellular component | condensed nuclear chromosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0008097 | Molecular function | 5S rRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RRS1 |
Protein name | Ribosome biogenesis regulatory protein homolog |
Synonyms | KIAA0112 RRR |
Description | FUNCTION: Involved in ribosomal large subunit assembly. May regulate the localization of the 5S RNP/5S ribonucleoprotein particle to the nucleolus. . |
Accessions | ENST00000320270.4 Q15050 |