Insufficient scRNA-seq data for expression of NXF5 at single-cell level.
Insufficient scRNA-seq data for expression of NXF5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 97% | 19.69 | 86 / 89 | 2% | 0.03 | 20 / 901 |
brain | 90% | 19.54 | 2390 / 2642 | 2% | 0.03 | 15 / 705 |
thymus | 92% | 12.77 | 601 / 653 | 0% | 0 | 0 / 605 |
adrenal gland | 89% | 11.12 | 230 / 258 | 3% | 0.04 | 6 / 230 |
breast | 86% | 9.51 | 397 / 459 | 2% | 0.03 | 20 / 1118 |
spleen | 87% | 9.76 | 209 / 241 | 0% | 0 | 0 / 0 |
liver | 85% | 9.89 | 191 / 226 | 0% | 0 | 0 / 406 |
blood vessel | 83% | 8.70 | 1105 / 1335 | 0% | 0 | 0 / 0 |
adipose | 79% | 7.80 | 952 / 1204 | 0% | 0 | 0 / 0 |
bladder | 76% | 4.48 | 16 / 21 | 0% | 0 | 0 / 504 |
lung | 74% | 6.76 | 425 / 578 | 0% | 0 | 0 / 1155 |
prostate | 73% | 6.19 | 179 / 245 | 0% | 0 | 0 / 502 |
uterus | 68% | 4.86 | 116 / 170 | 0% | 0.00 | 1 / 459 |
intestine | 63% | 4.66 | 610 / 966 | 0% | 0.01 | 1 / 527 |
heart | 62% | 4.23 | 531 / 861 | 0% | 0 | 0 / 0 |
stomach | 57% | 3.69 | 204 / 359 | 0% | 0 | 0 / 286 |
esophagus | 53% | 4.02 | 768 / 1445 | 1% | 0.02 | 2 / 183 |
muscle | 53% | 3.11 | 424 / 803 | 0% | 0 | 0 / 0 |
ovary | 51% | 2.82 | 91 / 180 | 0% | 0.00 | 1 / 430 |
pancreas | 46% | 2.58 | 151 / 328 | 1% | 0.01 | 1 / 178 |
skin | 28% | 1.57 | 502 / 1809 | 0% | 0 | 0 / 472 |
peripheral blood | 13% | 0.63 | 120 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006406 | Biological process | mRNA export from nucleus |
GO_0050658 | Biological process | RNA transport |
GO_0016973 | Biological process | poly(A)+ mRNA export from nucleus |
GO_0042272 | Cellular component | nuclear RNA export factor complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | NXF5 |
Protein name | Alternative protein NXF5 Nuclear RNA export factor 5 (TAP-like protein 1) (TAPL-1) |
Synonyms | TAPL1 |
Description | FUNCTION: Could be involved in the export of mRNA from the nucleus to the cytoplasm. Could also have a role in polarized cytoplasmic transport and localization of mRNA in neurons. |
Accessions | Q9H1B4 L8E758 |