NIFK report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	13 studies	21% ± 7%	Explore
natural killer cell	12 studies	22% ± 8%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	10 studies	19% ± 4%	Explore
CD8-positive, alpha-beta T cell	10 studies	27% ± 13%	Explore
naive B cell	9 studies	19% ± 4%	Explore
CD4-positive, alpha-beta T cell	9 studies	28% ± 11%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	8 studies	21% ± 5%	Explore
B cell	8 studies	21% ± 6%	Explore
basal cell	8 studies	27% ± 11%	Explore
endothelial cell	7 studies	25% ± 7%	Explore
CD16-negative, CD56-bright natural killer cell, human	6 studies	22% ± 4%	Explore
pericyte	6 studies	21% ± 4%	Explore
smooth muscle cell	6 studies	18% ± 2%	Explore
epithelial cell	6 studies	39% ± 17%	Explore
plasmacytoid dendritic cell	6 studies	23% ± 7%	Explore
classical monocyte	5 studies	22% ± 8%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	19% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	5 studies	18% ± 4%	Explore
myofibroblast cell	5 studies	19% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	18% ± 3%	Explore
endothelial cell of lymphatic vessel	4 studies	25% ± 6%	Explore
hematopoietic precursor cell	4 studies	32% ± 11%	Explore
non-classical monocyte	4 studies	24% ± 7%	Explore
conventional dendritic cell	4 studies	33% ± 17%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	20% ± 4%	Explore
connective tissue cell	4 studies	20% ± 4%	Explore
ciliated cell	4 studies	32% ± 7%	Explore
erythroblast	4 studies	27% ± 10%	Explore
endothelial cell of vascular tree	4 studies	22% ± 7%	Explore
hematopoietic stem cell	4 studies	20% ± 3%	Explore
gamma-delta T cell	4 studies	27% ± 19%	Explore
regulatory T cell	4 studies	25% ± 11%	Explore
leukocyte	3 studies	20% ± 4%	Explore
mature NK T cell	3 studies	29% ± 15%	Explore
neural crest cell	3 studies	24% ± 6%	Explore
immature B cell	3 studies	22% ± 7%	Explore
precursor B cell	3 studies	25% ± 5%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	20% ± 6%	Explore
memory B cell	3 studies	23% ± 10%	Explore
dendritic cell	3 studies	44% ± 9%	Explore
oligodendrocyte precursor cell	3 studies	23% ± 5%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	40% ± 19%	Explore
goblet cell	3 studies	23% ± 5%	Explore
double negative thymocyte	3 studies	28% ± 16%	Explore
mucosal invariant T cell	3 studies	19% ± 2%	Explore
secretory cell	3 studies	27% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	7 studies	23% ± 7%	Explore
lung	5 studies	25% ± 9%	Explore
intestine	3 studies	22% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1085.21	1445 / 1445	100%	48.09	183 / 183
ovary	100%	1365.26	180 / 180	100%	50.09	430 / 430
prostate	100%	1046.83	245 / 245	100%	34.21	502 / 502
stomach	100%	934.83	359 / 359	100%	43.85	286 / 286
breast	100%	1310.16	459 / 459	100%	42.14	1117 / 1118
brain	100%	830.67	2637 / 2642	100%	48.70	705 / 705
intestine	100%	1047.72	966 / 966	100%	47.21	525 / 527
bladder	100%	1319.95	21 / 21	100%	40.06	502 / 504
uterus	100%	1199.94	170 / 170	100%	44.01	457 / 459
skin	100%	1698.13	1809 / 1809	99%	46.92	469 / 472
thymus	100%	915.02	653 / 653	99%	30.17	600 / 605
lung	99%	865.94	573 / 578	100%	41.26	1155 / 1155
pancreas	100%	840.59	327 / 328	99%	30.88	177 / 178
kidney	100%	785.56	89 / 89	97%	23.92	874 / 901
liver	100%	659.82	226 / 226	96%	19.91	390 / 406
adrenal gland	100%	1085.92	258 / 258	94%	21.65	217 / 230
adipose	100%	1347.09	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	48.54	29 / 29
muscle	100%	1214.11	803 / 803	0%	0	0 / 0
spleen	100%	1065.22	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	37.11	45 / 45
ureter	0%	0	0 / 0	100%	20.72	1 / 1
blood vessel	100%	957.89	1334 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	96%	27.59	77 / 80
heart	95%	617.31	821 / 861	0%	0	0 / 0
peripheral blood	71%	833.38	659 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0