Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 34 studies | 43% ± 17% | |
endothelial cell | 30 studies | 34% ± 18% | |
smooth muscle cell | 29 studies | 40% ± 16% | |
fibroblast | 23 studies | 34% ± 14% | |
endothelial cell of lymphatic vessel | 12 studies | 32% ± 13% | |
type I pneumocyte | 12 studies | 45% ± 16% | |
astrocyte | 11 studies | 32% ± 17% | |
adipocyte | 10 studies | 64% ± 20% | |
myofibroblast cell | 8 studies | 36% ± 13% | |
capillary endothelial cell | 8 studies | 24% ± 11% | |
macrophage | 7 studies | 25% ± 9% | |
basal cell | 7 studies | 27% ± 9% | |
oligodendrocyte | 7 studies | 29% ± 10% | |
endothelial cell of artery | 6 studies | 23% ± 3% | |
mast cell | 6 studies | 24% ± 6% | |
vein endothelial cell | 5 studies | 29% ± 14% | |
cardiac muscle cell | 5 studies | 44% ± 12% | |
type II pneumocyte | 5 studies | 27% ± 5% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 11% | |
epithelial cell | 4 studies | 22% ± 7% | |
endothelial cell of vascular tree | 4 studies | 45% ± 19% | |
muscle cell | 4 studies | 54% ± 26% | |
erythrocyte | 4 studies | 32% ± 12% | |
club cell | 4 studies | 30% ± 4% | |
epithelial cell of proximal tubule | 4 studies | 39% ± 22% | |
hepatic stellate cell | 3 studies | 45% ± 18% | |
glomerular endothelial cell | 3 studies | 22% ± 0% | |
glial cell | 3 studies | 18% ± 3% | |
hepatocyte | 3 studies | 55% ± 21% | |
adventitial cell | 3 studies | 28% ± 7% | |
kidney loop of Henle epithelial cell | 3 studies | 25% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 98% | 34672.11 | 638 / 653 | 97% | 46.99 | 585 / 605 |
prostate | 98% | 67166.16 | 239 / 245 | 95% | 79.48 | 478 / 502 |
ovary | 96% | 42768.25 | 172 / 180 | 93% | 40.16 | 401 / 430 |
lung | 99% | 57281.40 | 572 / 578 | 89% | 46.40 | 1029 / 1155 |
breast | 97% | 51077.63 | 444 / 459 | 91% | 34.48 | 1012 / 1118 |
adrenal gland | 91% | 26683.45 | 235 / 258 | 84% | 38.04 | 194 / 230 |
kidney | 72% | 22502.44 | 64 / 89 | 98% | 134.93 | 883 / 901 |
esophagus | 80% | 105056.85 | 1153 / 1445 | 85% | 47.78 | 156 / 183 |
uterus | 98% | 94913.71 | 167 / 170 | 57% | 23.31 | 262 / 459 |
bladder | 100% | 111197.14 | 21 / 21 | 51% | 19.59 | 256 / 504 |
intestine | 80% | 111501.37 | 769 / 966 | 58% | 23.14 | 304 / 527 |
pancreas | 33% | 6991.62 | 107 / 328 | 92% | 51.70 | 164 / 178 |
stomach | 51% | 47413.38 | 184 / 359 | 72% | 48.31 | 206 / 286 |
skin | 42% | 11336.44 | 763 / 1809 | 79% | 34.96 | 371 / 472 |
brain | 7% | 1803.16 | 193 / 2642 | 98% | 35.82 | 688 / 705 |
blood vessel | 100% | 227765.08 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 67.23 | 80 / 80 |
adipose | 99% | 74092.60 | 1189 / 1204 | 0% | 0 | 0 / 0 |
muscle | 95% | 49445.19 | 763 / 803 | 0% | 0 | 0 / 0 |
heart | 92% | 47229.39 | 789 / 861 | 0% | 0 | 0 / 0 |
spleen | 83% | 22532.41 | 201 / 241 | 0% | 0 | 0 / 0 |
liver | 13% | 3074.46 | 30 / 226 | 67% | 17.74 | 274 / 406 |
tonsil | 0% | 0 | 0 / 0 | 62% | 14.02 | 28 / 45 |
lymph node | 0% | 0 | 0 / 0 | 28% | 4.37 | 8 / 29 |
peripheral blood | 1% | 242.83 | 10 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010761 | Biological process | fibroblast migration |
GO_0007044 | Biological process | cell-substrate junction assembly |
GO_0009986 | Cellular component | cell surface |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005737 | Cellular component | cytoplasm |
GO_0005925 | Cellular component | focal adhesion |
GO_0004721 | Molecular function | phosphoprotein phosphatase activity |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | TNS1 |
Protein name | Tensin 1 Tensin-1 (EC 3.1.3.-) TNS1 protein |
Synonyms | TNS hCG_1811886 |
Description | FUNCTION: May act as a protein phosphatase and/or a lipid phosphatase (Probable). Involved in fibrillar adhesion formation . Essential for myofibroblast differentiation and myofibroblast-mediated extracellular matrix deposition . Enhances RHOA activation in the presence of DLC1 . Plays a role in cell polarization and migration . May be involved in cartilage development and in linking signal transduction pathways to the cytoskeleton . . |
Accessions | Q0VG55 C9JI43 Q6PJM3 ENST00000453356.1 C9JZT0 A0A994J515 ENST00000651849.1 H7C3Z4 A0A494C067 H0Y4U1 E9PGF5 A1L0S7 ENST00000449814.1 ENST00000413554.5 Q9HBL0 A0A3B3IRK7 C9JFT7 E7ERH1 B2RU35 ENST00000646520.1 ENST00000413280.5 ENST00000446688.5 ENST00000615025.6 E9PF55 ENST00000682258.1 [Q9HBL0-3] ENST00000419504.6 C9J8K5 ENST00000705226.1 Q0VG54 ENST00000649572.1 E7EMG1 ENST00000446903.5 A0A2R8Y4T1 ENST00000171887.8 [Q9HBL0-1] ENST00000423413.1 Q86VB0 ENST00000310858.10 [Q9HBL0-2] ENST00000439083.5 |