Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 16 studies | 30% ± 12% | |
astrocyte | 11 studies | 33% ± 15% | |
oligodendrocyte precursor cell | 11 studies | 34% ± 13% | |
oligodendrocyte | 11 studies | 30% ± 11% | |
glutamatergic neuron | 10 studies | 47% ± 25% | |
GABAergic neuron | 9 studies | 43% ± 23% | |
ciliated cell | 8 studies | 22% ± 6% | |
microglial cell | 8 studies | 26% ± 9% | |
macrophage | 7 studies | 27% ± 7% | |
epithelial cell | 7 studies | 29% ± 14% | |
fibroblast | 7 studies | 24% ± 8% | |
neuron | 6 studies | 39% ± 15% | |
interneuron | 6 studies | 50% ± 24% | |
pericyte | 5 studies | 27% ± 14% | |
amacrine cell | 5 studies | 22% ± 9% | |
adipocyte | 5 studies | 23% ± 3% | |
basal cell | 5 studies | 25% ± 14% | |
endothelial cell of lymphatic vessel | 5 studies | 27% ± 6% | |
dendritic cell | 5 studies | 20% ± 6% | |
plasmacytoid dendritic cell | 5 studies | 20% ± 5% | |
granule cell | 4 studies | 29% ± 5% | |
B cell | 4 studies | 19% ± 4% | |
retina horizontal cell | 4 studies | 22% ± 9% | |
lymphocyte | 4 studies | 25% ± 7% | |
smooth muscle cell | 4 studies | 19% ± 1% | |
hematopoietic precursor cell | 3 studies | 23% ± 5% | |
GABAergic interneuron | 3 studies | 33% ± 6% | |
myeloid cell | 3 studies | 18% ± 1% | |
GABAergic amacrine cell | 3 studies | 22% ± 8% | |
glycinergic amacrine cell | 3 studies | 23% ± 3% | |
abnormal cell | 3 studies | 27% ± 11% | |
neural progenitor cell | 3 studies | 20% ± 0% | |
club cell | 3 studies | 22% ± 5% | |
T cell | 3 studies | 19% ± 3% | |
goblet cell | 3 studies | 37% ± 23% | |
transit amplifying cell | 3 studies | 33% ± 19% | |
mast cell | 3 studies | 22% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4413.10 | 1445 / 1445 | 100% | 20.61 | 183 / 183 |
prostate | 100% | 5241.20 | 245 / 245 | 100% | 22.08 | 500 / 502 |
brain | 100% | 4668.99 | 2639 / 2642 | 99% | 29.32 | 701 / 705 |
intestine | 100% | 4877.69 | 966 / 966 | 99% | 15.55 | 523 / 527 |
thymus | 100% | 6051.40 | 653 / 653 | 99% | 20.12 | 600 / 605 |
breast | 100% | 5802.50 | 459 / 459 | 99% | 21.80 | 1108 / 1118 |
uterus | 100% | 6526.15 | 170 / 170 | 99% | 16.68 | 454 / 459 |
bladder | 100% | 5327.33 | 21 / 21 | 99% | 15.40 | 497 / 504 |
stomach | 100% | 3762.90 | 359 / 359 | 98% | 15.29 | 281 / 286 |
lung | 100% | 4455.62 | 578 / 578 | 98% | 18.39 | 1134 / 1155 |
pancreas | 100% | 2845.14 | 327 / 328 | 98% | 15.45 | 175 / 178 |
skin | 100% | 6518.36 | 1809 / 1809 | 98% | 21.70 | 462 / 472 |
ovary | 100% | 7871.31 | 180 / 180 | 97% | 14.28 | 417 / 430 |
kidney | 100% | 3464.39 | 89 / 89 | 94% | 13.92 | 846 / 901 |
adrenal gland | 100% | 4909.53 | 258 / 258 | 93% | 13.00 | 213 / 230 |
liver | 98% | 1568.56 | 222 / 226 | 70% | 5.97 | 286 / 406 |
adipose | 100% | 5375.73 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4604.38 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 18.07 | 29 / 29 |
muscle | 100% | 3718.55 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4765.09 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.05 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 17.13 | 44 / 45 |
eye | 0% | 0 | 0 / 0 | 98% | 17.60 | 78 / 80 |
heart | 97% | 3064.59 | 838 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 71% | 2498.23 | 662 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032204 | Biological process | regulation of telomere maintenance |
GO_0008150 | Biological process | biological_process |
GO_0016607 | Cellular component | nuclear speck |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | YLPM1 |
Protein name | YLP motif-containing protein 1 (Nuclear protein ZAP3) (ZAP113) YLP motif containing 1 YLPM1 protein |
Synonyms | ZAP3 C14orf170 |
Description | FUNCTION: Plays a role in the reduction of telomerase activity during differentiation of embryonic stem cells by binding to the core promoter of TERT and controlling its down-regulation. . |
Accessions | H0YIQ2 H0YI23 ENST00000325680.12 [P49750-4] Q86YA8 ENST00000547879.5 ENST00000552421.5 ENST00000549293.5 P49750 ENST00000554107.2 U3KQT9 Q6PJ41 F8VU51 |