Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 23% ± 4% | |
epithelial cell | 5 studies | 31% ± 12% | |
macrophage | 5 studies | 19% ± 4% | |
endothelial cell of lymphatic vessel | 4 studies | 19% ± 2% | |
fibroblast | 4 studies | 18% ± 2% | |
dendritic cell | 4 studies | 32% ± 9% | |
basal cell | 4 studies | 22% ± 5% | |
astrocyte | 4 studies | 32% ± 14% | |
oligodendrocyte | 4 studies | 27% ± 6% | |
ciliated cell | 3 studies | 24% ± 6% | |
pericyte | 3 studies | 17% ± 1% | |
GABAergic neuron | 3 studies | 40% ± 7% | |
glutamatergic neuron | 3 studies | 52% ± 3% | |
microglial cell | 3 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 444.62 | 1445 / 1445 | 100% | 13.65 | 183 / 183 |
lung | 100% | 478.32 | 577 / 578 | 100% | 12.40 | 1151 / 1155 |
ovary | 100% | 399.67 | 180 / 180 | 99% | 9.19 | 427 / 430 |
breast | 100% | 697.44 | 459 / 459 | 99% | 16.91 | 1102 / 1118 |
uterus | 100% | 484.51 | 170 / 170 | 97% | 11.97 | 447 / 459 |
stomach | 100% | 331.80 | 359 / 359 | 97% | 13.36 | 277 / 286 |
intestine | 100% | 436.62 | 966 / 966 | 97% | 13.40 | 509 / 527 |
brain | 98% | 230.57 | 2581 / 2642 | 99% | 10.65 | 697 / 705 |
pancreas | 98% | 233.71 | 322 / 328 | 98% | 10.19 | 175 / 178 |
prostate | 100% | 423.01 | 245 / 245 | 96% | 12.90 | 483 / 502 |
thymus | 100% | 512.75 | 653 / 653 | 96% | 11.94 | 581 / 605 |
bladder | 100% | 547.33 | 21 / 21 | 95% | 10.88 | 479 / 504 |
kidney | 100% | 366.99 | 89 / 89 | 93% | 11.63 | 834 / 901 |
skin | 100% | 597.16 | 1806 / 1809 | 91% | 12.85 | 428 / 472 |
adrenal gland | 100% | 345.57 | 258 / 258 | 87% | 6.95 | 199 / 230 |
liver | 98% | 224.08 | 222 / 226 | 83% | 6.06 | 337 / 406 |
adipose | 100% | 685.91 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 510.85 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 344.42 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 473.01 | 1334 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 10.86 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 96% | 13.71 | 43 / 45 |
heart | 93% | 268.15 | 798 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 60% | 4.99 | 48 / 80 |
peripheral blood | 52% | 256.95 | 479 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030490 | Biological process | maturation of SSU-rRNA |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0030686 | Cellular component | 90S preribosome |
GO_0005634 | Cellular component | nucleus |
GO_0003723 | Molecular function | RNA binding |
Gene name | SRFBP1 |
Protein name | Serum response factor-binding protein 1 (SRF-dependent transcription regulation-associated protein) (p49/STRAP) |
Synonyms | |
Description | FUNCTION: May be involved in regulating transcriptional activation of cardiac genes during the aging process. May play a role in biosynthesis and/or processing of SLC2A4 in adipose cells (By similarity). . |
Accessions | ENST00000339397.5 Q8NEF9 |