I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 5 studies | 25% ± 9% | |
| endothelial cell | 4 studies | 18% ± 2% | |
| dendritic cell | 3 studies | 27% ± 13% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 5 studies | 25% ± 9% | |
| endothelial cell | 4 studies | 18% ± 2% | |
| dendritic cell | 3 studies | 27% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 1703.52 | 459 / 459 | 100% | 75.09 | 1118 / 1118 |
| esophagus | 100% | 1710.30 | 1445 / 1445 | 100% | 73.76 | 183 / 183 |
| liver | 100% | 1174.23 | 226 / 226 | 100% | 45.37 | 406 / 406 |
| lung | 100% | 1555.33 | 578 / 578 | 100% | 66.20 | 1155 / 1155 |
| ovary | 100% | 1118.16 | 180 / 180 | 100% | 60.44 | 430 / 430 |
| pancreas | 100% | 1143.73 | 328 / 328 | 100% | 49.68 | 178 / 178 |
| prostate | 100% | 1811.48 | 245 / 245 | 100% | 56.10 | 502 / 502 |
| stomach | 100% | 1370.01 | 359 / 359 | 100% | 57.93 | 286 / 286 |
| brain | 100% | 1101.59 | 2637 / 2642 | 100% | 55.87 | 705 / 705 |
| intestine | 100% | 1584.41 | 966 / 966 | 100% | 56.75 | 526 / 527 |
| uterus | 100% | 1540.13 | 170 / 170 | 100% | 74.02 | 458 / 459 |
| thymus | 100% | 1541.65 | 653 / 653 | 100% | 48.06 | 603 / 605 |
| bladder | 100% | 1736.52 | 21 / 21 | 100% | 68.58 | 502 / 504 |
| skin | 100% | 2157.08 | 1809 / 1809 | 100% | 78.20 | 470 / 472 |
| kidney | 100% | 1618.15 | 89 / 89 | 99% | 37.37 | 896 / 901 |
| adrenal gland | 100% | 1866.72 | 258 / 258 | 99% | 50.55 | 227 / 230 |
| adipose | 100% | 1678.43 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1645.57 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 93.02 | 29 / 29 |
| spleen | 100% | 1959.24 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 68.28 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 62.63 | 1 / 1 |
| muscle | 100% | 1538.89 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 1020.33 | 855 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 50.34 | 79 / 80 |
| peripheral blood | 98% | 1250.19 | 911 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0000462 | Biological process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0006364 | Biological process | rRNA processing |
| GO_0042274 | Biological process | ribosomal small subunit biogenesis |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0030686 | Cellular component | 90S preribosome |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | RRP36 |
| Protein name | Ribosomal RNA processing protein 36 homolog Ribosomal RNA processing 36 |
| Synonyms | HSPC253 C6orf153 |
| Description | FUNCTION: Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA. . |
| Accessions | ENST00000244496.6 [Q96EU6-1] Q96EU6 U3KPZ9 ENST00000607394.1 |
