GPATCH8 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
natural killer cell	31 studies	29% ± 10%	Explore
endothelial cell	28 studies	35% ± 16%	Explore
fibroblast	21 studies	32% ± 14%	Explore
astrocyte	19 studies	44% ± 20%	Explore
pericyte	18 studies	31% ± 15%	Explore
T cell	17 studies	25% ± 9%	Explore
oligodendrocyte	16 studies	43% ± 16%	Explore
CD8-positive, alpha-beta T cell	16 studies	22% ± 8%	Explore
oligodendrocyte precursor cell	15 studies	43% ± 20%	Explore
B cell	14 studies	28% ± 10%	Explore
CD16-positive, CD56-dim natural killer cell, human	13 studies	30% ± 12%	Explore
glutamatergic neuron	13 studies	63% ± 25%	Explore
CD16-negative, CD56-bright natural killer cell, human	13 studies	28% ± 13%	Explore
CD4-positive, alpha-beta T cell	13 studies	23% ± 9%	Explore
microglial cell	13 studies	43% ± 13%	Explore
macrophage	12 studies	36% ± 16%	Explore
regulatory T cell	12 studies	21% ± 7%	Explore
smooth muscle cell	12 studies	33% ± 12%	Explore
GABAergic neuron	11 studies	58% ± 23%	Explore
naive B cell	10 studies	20% ± 4%	Explore
mature NK T cell	10 studies	24% ± 8%	Explore
gamma-delta T cell	10 studies	23% ± 8%	Explore
neuron	9 studies	46% ± 23%	Explore
epithelial cell	9 studies	40% ± 20%	Explore
memory B cell	9 studies	19% ± 4%	Explore
adipocyte	9 studies	56% ± 14%	Explore
basal cell	9 studies	34% ± 19%	Explore
amacrine cell	8 studies	44% ± 14%	Explore
mast cell	8 studies	26% ± 9%	Explore
CD8-positive, alpha-beta memory T cell	8 studies	21% ± 4%	Explore
endothelial cell of lymphatic vessel	8 studies	36% ± 13%	Explore
type I pneumocyte	8 studies	31% ± 13%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	7 studies	24% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	29% ± 10%	Explore
connective tissue cell	7 studies	25% ± 8%	Explore
interneuron	7 studies	59% ± 26%	Explore
mucosal invariant T cell	7 studies	23% ± 8%	Explore
myeloid cell	7 studies	30% ± 8%	Explore
retinal cone cell	7 studies	48% ± 17%	Explore
retinal rod cell	7 studies	40% ± 17%	Explore
dendritic cell	7 studies	36% ± 11%	Explore
ciliated cell	7 studies	31% ± 11%	Explore
retinal ganglion cell	6 studies	43% ± 16%	Explore
myofibroblast cell	6 studies	30% ± 14%	Explore
retina horizontal cell	6 studies	53% ± 13%	Explore
type II pneumocyte	6 studies	34% ± 11%	Explore
club cell	6 studies	32% ± 14%	Explore
non-classical monocyte	5 studies	27% ± 13%	Explore
capillary endothelial cell	5 studies	22% ± 6%	Explore
abnormal cell	5 studies	29% ± 16%	Explore
retinal bipolar neuron	5 studies	31% ± 11%	Explore
cardiac muscle cell	5 studies	52% ± 11%	Explore
mesothelial cell	5 studies	36% ± 14%	Explore
Mueller cell	5 studies	36% ± 7%	Explore
innate lymphoid cell	5 studies	28% ± 12%	Explore
monocyte	5 studies	36% ± 10%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	19% ± 2%	Explore
leukocyte	4 studies	29% ± 11%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	24% ± 6%	Explore
granule cell	4 studies	60% ± 13%	Explore
retinal pigment epithelial cell	4 studies	37% ± 25%	Explore
vein endothelial cell	4 studies	28% ± 19%	Explore
lymphocyte	4 studies	41% ± 13%	Explore
OFF-bipolar cell	4 studies	31% ± 11%	Explore
ON-bipolar cell	4 studies	34% ± 13%	Explore
muscle cell	4 studies	50% ± 32%	Explore
respiratory goblet cell	4 studies	35% ± 17%	Explore
goblet cell	4 studies	35% ± 28%	Explore
plasmacytoid dendritic cell	4 studies	19% ± 4%	Explore
classical monocyte	3 studies	27% ± 8%	Explore
exhausted T cell	3 studies	24% ± 10%	Explore
GABAergic interneuron	3 studies	53% ± 3%	Explore
glial cell	3 studies	35% ± 3%	Explore
progenitor cell	3 studies	33% ± 3%	Explore
precursor B cell	3 studies	23% ± 3%	Explore
plasma cell	3 studies	35% ± 8%	Explore
immature B cell	3 studies	19% ± 2%	Explore
mononuclear phagocyte	3 studies	28% ± 4%	Explore
GABAergic amacrine cell	3 studies	54% ± 4%	Explore
glycinergic amacrine cell	3 studies	47% ± 2%	Explore
rod bipolar cell	3 studies	38% ± 13%	Explore
endothelial cell of vascular tree	3 studies	35% ± 11%	Explore
hepatocyte	3 studies	47% ± 16%	Explore
neural progenitor cell	3 studies	40% ± 14%	Explore
ependymal cell	3 studies	50% ± 14%	Explore
alveolar macrophage	3 studies	39% ± 11%	Explore
chondrocyte	3 studies	37% ± 11%	Explore
T follicular helper cell	3 studies	19% ± 2%	Explore
Schwann cell	3 studies	36% ± 17%	Explore
transit amplifying cell	3 studies	40% ± 30%	Explore
mural cell	3 studies	41% ± 8%	Explore
mucus secreting cell	3 studies	29% ± 10%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	18 studies	53% ± 22%	Explore
peripheral blood	9 studies	24% ± 9%	Explore
lung	9 studies	28% ± 9%	Explore
eye	8 studies	42% ± 17%	Explore
heart	5 studies	38% ± 11%	Explore
liver	4 studies	34% ± 15%	Explore
intestine	4 studies	21% ± 7%	Explore
adipose	4 studies	44% ± 24%	Explore
kidney	3 studies	27% ± 7%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	2914.45	966 / 966	100%	20.51	526 / 527
ovary	100%	4261.00	180 / 180	100%	18.62	429 / 430
bladder	100%	2852.62	21 / 21	100%	18.96	502 / 504
esophagus	100%	2722.26	1439 / 1445	100%	30.69	183 / 183
lung	100%	2392.83	577 / 578	100%	22.74	1152 / 1155
breast	100%	3176.88	459 / 459	100%	23.98	1113 / 1118
skin	100%	3425.59	1805 / 1809	99%	24.72	468 / 472
stomach	99%	1955.89	356 / 359	99%	21.89	284 / 286
thymus	100%	3620.94	651 / 653	99%	22.37	596 / 605
uterus	100%	4120.86	170 / 170	98%	19.19	448 / 459
prostate	100%	2482.66	244 / 245	98%	16.43	492 / 502
kidney	100%	1659.43	89 / 89	97%	18.26	876 / 901
brain	96%	3169.39	2529 / 2642	100%	29.10	704 / 705
adrenal gland	99%	2088.19	255 / 258	97%	16.26	222 / 230
pancreas	97%	1276.97	318 / 328	98%	19.14	175 / 178
liver	89%	837.84	202 / 226	77%	8.22	314 / 406
spleen	100%	2362.89	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	21.43	45 / 45
ureter	0%	0	0 / 0	100%	5.32	1 / 1
adipose	100%	2913.70	1203 / 1204	0%	0	0 / 0
muscle	100%	5539.58	802 / 803	0%	0	0 / 0
blood vessel	100%	2819.08	1333 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	16.49	28 / 29
eye	0%	0	0 / 0	96%	15.75	77 / 80
heart	93%	2203.93	803 / 861	0%	0	0 / 0
peripheral blood	63%	1483.92	589 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0008150	Biological process	biological_process
GO_0005575	Cellular component	cellular_component
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding
GO_0046872	Molecular function	metal ion binding
GO_0003723	Molecular function	RNA binding

Gene name	GPATCH8
Protein name	G-patch domain containing 8 G patch domain-containing protein 8
Synonyms	KIAA0553 GPATC8
Description
Accessions	ENST00000585614.1 ENST00000587228.5 [Q9UKJ3-3] K7EQK8 ENST00000591680.6 [Q9UKJ3-1] Q9UKJ3 K7EKU0 ENST00000590041.5 ENST00000586037.5 ENST00000592746.5

GPATCH8 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review