Name | Number of supported studies | Average coverage | |
---|---|---|---|
platelet | 4 studies | 18% ± 2% | |
epithelial cell | 3 studies | 26% ± 7% |
Insufficient scRNA-seq data for expression of MEPCE at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3111.67 | 1445 / 1445 | 100% | 70.33 | 183 / 183 |
liver | 100% | 2244.60 | 226 / 226 | 100% | 52.83 | 406 / 406 |
ovary | 100% | 4228.08 | 180 / 180 | 100% | 91.67 | 430 / 430 |
skin | 100% | 3838.88 | 1809 / 1809 | 100% | 96.46 | 472 / 472 |
thymus | 100% | 4827.07 | 653 / 653 | 100% | 120.97 | 605 / 605 |
uterus | 100% | 3776.78 | 170 / 170 | 100% | 81.78 | 459 / 459 |
kidney | 100% | 3385.07 | 89 / 89 | 100% | 72.56 | 900 / 901 |
brain | 100% | 2732.11 | 2638 / 2642 | 100% | 98.83 | 705 / 705 |
prostate | 100% | 3369.39 | 245 / 245 | 100% | 78.02 | 501 / 502 |
breast | 100% | 3132.31 | 459 / 459 | 100% | 82.25 | 1114 / 1118 |
intestine | 100% | 3139.27 | 966 / 966 | 99% | 68.41 | 523 / 527 |
lung | 100% | 2838.88 | 576 / 578 | 100% | 62.63 | 1150 / 1155 |
adrenal gland | 100% | 4687.43 | 258 / 258 | 99% | 58.31 | 228 / 230 |
bladder | 100% | 3519.57 | 21 / 21 | 99% | 63.58 | 497 / 504 |
stomach | 99% | 2400.47 | 356 / 359 | 99% | 65.55 | 284 / 286 |
pancreas | 98% | 1506.39 | 322 / 328 | 100% | 56.91 | 178 / 178 |
adipose | 100% | 3248.53 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 108.07 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 111.97 | 29 / 29 |
muscle | 100% | 2732.46 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6803.61 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 89.47 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 42.16 | 1 / 1 |
blood vessel | 100% | 2594.26 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1677.12 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 2535.84 | 905 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1900087 | Biological process | positive regulation of G1/S transition of mitotic cell cycle |
GO_1905382 | Biological process | positive regulation of snRNA transcription by RNA polymerase II |
GO_0001510 | Biological process | RNA methylation |
GO_0040031 | Biological process | snRNA modification |
GO_0016073 | Biological process | snRNA metabolic process |
GO_1904871 | Biological process | positive regulation of protein localization to Cajal body |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0120259 | Cellular component | 7SK snRNP |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005634 | Cellular component | nucleus |
GO_0008171 | Molecular function | O-methyltransferase activity |
GO_0008173 | Molecular function | RNA methyltransferase activity |
GO_0017069 | Molecular function | snRNA binding |
GO_0097322 | Molecular function | 7SK snRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_1990276 | Molecular function | RNA 5'-gamma-phosphate methyltransferase activity |
GO_0008757 | Molecular function | S-adenosylmethionine-dependent methyltransferase activity |
GO_0003723 | Molecular function | RNA binding |
Gene name | MEPCE |
Protein name | RNA methyltransferase (EC 2.1.1.-) 7SK snRNA methylphosphate capping enzyme (MePCE) (EC 2.1.1.-) (Bicoid-interacting protein 3 homolog) (Bin3 homolog) |
Synonyms | BCDIN3 |
Description | FUNCTION: S-adenosyl-L-methionine-dependent methyltransferase that adds a methylphosphate cap at the 5'-end of 7SK snRNA (7SK RNA), leading to stabilize it . Also has a non-enzymatic function as part of the 7SK RNP complex: the 7SK RNP complex sequesters the positive transcription elongation factor b (P-TEFb) in a large inactive 7SK RNP complex preventing RNA polymerase II phosphorylation and subsequent transcriptional elongation . The 7SK RNP complex also promotes snRNA gene transcription by RNA polymerase II via interaction with the little elongation complex (LEC) . In the 7SK RNP complex, MEPCE is required to stabilize 7SK RNA and facilitate the assembly of 7SK RNP complex . MEPCE has a non-enzymatic function in the 7SK RNP complex; interaction with LARP7 within the 7SK RNP complex occluding its catalytic center . . |
Accessions | ENST00000695111.1 [Q7L2J0-2] Q7L2J0 ENST00000695113.1 ENST00000497759.2 [Q7L2J0-2] ENST00000414441.5 [Q7L2J0-2] ENST00000310512.4 [Q7L2J0-1] A0A8Q3WKJ6 ENST00000479201.2 [Q7L2J0-2] |