Insufficient scRNA-seq data for expression of RPUSD1 at single-cell level.
Insufficient scRNA-seq data for expression of RPUSD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 761.02 | 180 / 180 | 100% | 52.29 | 430 / 430 |
esophagus | 100% | 1109.02 | 1443 / 1445 | 100% | 29.87 | 183 / 183 |
brain | 100% | 1236.50 | 2636 / 2642 | 100% | 32.29 | 705 / 705 |
uterus | 100% | 1028.92 | 170 / 170 | 100% | 40.43 | 457 / 459 |
thymus | 100% | 1046.08 | 653 / 653 | 100% | 26.61 | 602 / 605 |
intestine | 100% | 1221.52 | 966 / 966 | 99% | 48.44 | 523 / 527 |
prostate | 100% | 1356.16 | 245 / 245 | 99% | 32.03 | 498 / 502 |
skin | 100% | 1511.80 | 1809 / 1809 | 99% | 44.10 | 468 / 472 |
stomach | 100% | 1131.58 | 359 / 359 | 99% | 42.90 | 283 / 286 |
breast | 100% | 1110.25 | 459 / 459 | 99% | 38.75 | 1103 / 1118 |
bladder | 100% | 1123.71 | 21 / 21 | 98% | 40.76 | 496 / 504 |
pancreas | 100% | 782.68 | 327 / 328 | 98% | 26.58 | 175 / 178 |
kidney | 100% | 1033.53 | 89 / 89 | 98% | 22.44 | 883 / 901 |
adrenal gland | 100% | 1053.57 | 258 / 258 | 97% | 20.79 | 223 / 230 |
liver | 100% | 705.62 | 226 / 226 | 96% | 18.96 | 390 / 406 |
lung | 96% | 879.57 | 556 / 578 | 98% | 31.64 | 1136 / 1155 |
adipose | 100% | 964.75 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 45.83 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 53.90 | 29 / 29 |
spleen | 100% | 1882.26 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 39.98 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 40.12 | 1 / 1 |
blood vessel | 100% | 845.03 | 1330 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 1383.75 | 911 / 929 | 0% | 0 | 0 / 0 |
muscle | 98% | 546.72 | 786 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 587.80 | 839 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0000455 | Biological process | enzyme-directed rRNA pseudouridine synthesis |
GO_0005575 | Cellular component | cellular_component |
GO_0009982 | Molecular function | pseudouridine synthase activity |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPUSD1 |
Protein name | RNA pseudouridine synthase domain containing 1 (RNA pseudouridylate synthase domain containing 1, isoform CRA_b) RNA pseudouridine synthase domain containing 1 RPUSD1 protein RNA pseudouridylate synthase domain-containing protein 1 (Ribosomal large subunit pseudouridine synthase C-like protein) |
Synonyms | C16orf40 hCG_1984148 RLUCL |
Description | |
Accessions | H3BMZ6 ENST00000565377.1 H3BQN8 H3BS55 H3BSG4 ENST00000567283.5 ENST00000567114.5 Q9UJJ7 Q96E34 ENST00000561734.5 ENST00000565809.5 ENST00000565503.5 ENST00000007264.7 H3BVD0 ENST00000569601.5 ENST00000563560.1 H3BU91 H3BRG3 H3BUN6 ENST00000562070.1 |