Name | Number of supported studies | Average coverage | |
---|---|---|---|
CD16-negative, CD56-bright natural killer cell, human | 8 studies | 21% ± 6% | |
B cell | 6 studies | 25% ± 6% | |
natural killer cell | 6 studies | 22% ± 5% | |
endothelial cell | 6 studies | 21% ± 4% | |
plasmacytoid dendritic cell | 6 studies | 23% ± 7% | |
epithelial cell | 5 studies | 32% ± 15% | |
innate lymphoid cell | 5 studies | 18% ± 4% | |
classical monocyte | 4 studies | 26% ± 10% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 22% ± 4% | |
plasma cell | 4 studies | 24% ± 11% | |
basal cell | 4 studies | 20% ± 4% | |
naive B cell | 4 studies | 18% ± 2% | |
non-classical monocyte | 3 studies | 30% ± 10% | |
conventional dendritic cell | 3 studies | 32% ± 17% | |
gamma-delta T cell | 3 studies | 27% ± 11% | |
macrophage | 3 studies | 25% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5490.58 | 1445 / 1445 | 100% | 31.87 | 183 / 183 |
pancreas | 100% | 6318.78 | 328 / 328 | 100% | 41.55 | 178 / 178 |
skin | 100% | 5882.07 | 1809 / 1809 | 100% | 36.95 | 472 / 472 |
prostate | 100% | 8887.26 | 245 / 245 | 100% | 47.64 | 501 / 502 |
uterus | 100% | 7692.31 | 170 / 170 | 100% | 51.15 | 458 / 459 |
intestine | 100% | 6937.48 | 966 / 966 | 100% | 40.84 | 525 / 527 |
breast | 100% | 7327.68 | 459 / 459 | 100% | 37.24 | 1113 / 1118 |
thymus | 100% | 10898.56 | 653 / 653 | 100% | 53.59 | 602 / 605 |
bladder | 100% | 5750.48 | 21 / 21 | 99% | 47.64 | 501 / 504 |
lung | 100% | 8460.04 | 578 / 578 | 99% | 36.39 | 1147 / 1155 |
adrenal gland | 100% | 7315.04 | 258 / 258 | 99% | 35.40 | 228 / 230 |
stomach | 100% | 5522.89 | 359 / 359 | 99% | 38.32 | 283 / 286 |
ovary | 100% | 11891.27 | 180 / 180 | 99% | 29.28 | 425 / 430 |
liver | 100% | 6320.35 | 226 / 226 | 98% | 25.90 | 399 / 406 |
kidney | 100% | 5638.08 | 89 / 89 | 98% | 29.74 | 880 / 901 |
brain | 94% | 2525.26 | 2476 / 2642 | 100% | 36.76 | 703 / 705 |
adipose | 100% | 6255.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 60.97 | 29 / 29 |
spleen | 100% | 14096.45 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 41.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 36.10 | 1 / 1 |
blood vessel | 100% | 4911.24 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3282.93 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 8236.30 | 919 / 929 | 0% | 0 | 0 / 0 |
muscle | 98% | 2478.40 | 787 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 21.86 | 76 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0042113 | Biological process | B cell activation |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0016607 | Cellular component | nuclear speck |
GO_0005829 | Cellular component | cytosol |
GO_0005681 | Cellular component | spliceosomal complex |
GO_0005634 | Cellular component | nucleus |
GO_0051018 | Molecular function | protein kinase A binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | AKAP17A |
Protein name | A-kinase anchoring protein 17A (HCG1981394, isoform CRA_d) A-kinase anchor protein 17A (AKAP-17A) (721P) (B-lymphocyte antigen) (Protein XE7) (Protein kinase A-anchoring protein 17A) (PRKA17A) (Splicing factor, arginine/serine-rich 17A) |
Synonyms | DXYS155E hCG_1981394 CXYorf3 SFRS17A XE7 |
Description | FUNCTION: Splice factor regulating alternative splice site selection for certain mRNA precursors. Mediates regulation of pre-mRNA splicing in a PKA-dependent manner. . |
Accessions | Q02040 ENST00000381261.8 ENST00000313871.9 [Q02040-1] ENST00000711185.1 X6RAJ1 ENST00000711132.1 [Q02040-1] ENST00000474361.6 [Q02040-2] ENST00000711186.1 [Q02040-2] |