TRDMT1 | OmnibusX

Name	Number of supported studies	Average coverage
Mueller cell	4 studies	24% ± 2%	Explore
astrocyte	4 studies	35% ± 8%	Explore
glutamatergic neuron	4 studies	33% ± 15%	Explore
GABAergic neuron	3 studies	37% ± 8%	Explore
oligodendrocyte precursor cell	3 studies	20% ± 4%	Explore

Name	Number of supported studies	Average coverage
brain	4 studies	27% ± 4%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	758.03	653 / 653	94%	2.50	569 / 605
brain	99%	464.05	2625 / 2642	91%	1.73	641 / 705
prostate	100%	409.77	245 / 245	90%	1.81	452 / 502
kidney	100%	293.33	89 / 89	75%	1.70	675 / 901
esophagus	100%	301.73	1440 / 1445	74%	1.52	136 / 183
lung	100%	439.12	577 / 578	74%	1.46	850 / 1155
ovary	100%	817.87	180 / 180	73%	1.68	314 / 430
skin	100%	437.81	1803 / 1809	72%	1.41	338 / 472
stomach	99%	269.17	357 / 359	68%	1.23	195 / 286
breast	100%	537.71	459 / 459	65%	1.26	724 / 1118
intestine	100%	364.55	965 / 966	59%	0.91	312 / 527
adrenal gland	100%	367.18	258 / 258	57%	0.89	131 / 230
bladder	100%	352.48	21 / 21	43%	0.73	216 / 504
pancreas	98%	247.30	323 / 328	44%	0.62	78 / 178
uterus	100%	645.34	170 / 170	42%	0.84	192 / 459
blood vessel	100%	671.82	1335 / 1335	0%	0	0 / 0
spleen	100%	433.46	241 / 241	0%	0	0 / 0
adipose	100%	480.75	1203 / 1204	0%	0	0 / 0
muscle	97%	207.99	775 / 803	0%	0	0 / 0
heart	95%	252.44	817 / 861	0%	0	0 / 0
peripheral blood	77%	201.17	714 / 929	0%	0	0 / 0
liver	46%	54.04	104 / 226	8%	0.13	32 / 406
lymph node	0%	0	0 / 0	52%	0.95	15 / 29
eye	0%	0	0 / 0	45%	0.86	36 / 80
tonsil	0%	0	0 / 0	42%	0.63	19 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0036416	Biological process	tRNA stabilization
GO_0001975	Biological process	response to amphetamine
GO_0006400	Biological process	tRNA modification
GO_0030488	Biological process	tRNA methylation
GO_0005654	Cellular component	nucleoplasm
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0008175	Molecular function	tRNA methyltransferase activity
GO_0016428	Molecular function	tRNA (cytidine-5-)-methyltransferase activity
GO_0003723	Molecular function	RNA binding

Gene name	TRDMT1
Protein name	tRNA (cytosine(38)-C(5))-methyltransferase (EC 2.1.1.204) (DNA (cytosine-5)-methyltransferase-like protein 2) (Dnmt2) (DNA methyltransferase homolog HsaIIP) (DNA MTase homolog HsaIIP) (M.HsaIIP) (PuMet) cDNA FLJ52038, highly similar to DNA (cytosine-5)-methyltransferase-like protein 2 (tRNA aspartic acid methyltransferase 1) tRNA aspartic acid methyltransferase 1 tRNA (cytosine(38)-C(5))-methyltransferase (EC 2.1.1.204) (DNA (cytosine-5)-methyltransferase-like protein 2) tRNA aspartic acid methyltransferase 1 variant 5
Synonyms	hCG_23994 DNMT2 DKFZp686N1286
Description	FUNCTION: Specifically methylates cytosine 38 in the anticodon loop of tRNA(Asp) . Has higher activity on tRNA(Asp) modified with queuosine at position 34 . .
Accessions	ENST00000377799.8 [O14717-1] ENST00000495022.5 [O14717-4] B7Z8H2 ENST00000525762.5 H0Y4A2 Q7Z3E4 O14717 ENST00000313936.14 A0A0C4DG18 ENST00000354631.7 ENST00000488990.5 A0A0B4J214 B0YJ06 ENST00000424636.2 Q6ICS7 ENST00000436968.6 H0Y2T8

TRDMT1 report