BOP1 | OmnibusX

Name	Number of supported studies	Average coverage
dendritic cell	3 studies	21% ± 4%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of BOP1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
uterus	100%	1926.67	170 / 170	100%	87.75	459 / 459
ovary	100%	1350.78	180 / 180	100%	82.40	429 / 430
pancreas	100%	2120.49	328 / 328	99%	51.27	177 / 178
esophagus	100%	2112.72	1444 / 1445	99%	81.47	182 / 183
prostate	100%	2058.85	245 / 245	99%	58.53	498 / 502
skin	100%	2867.95	1808 / 1809	99%	108.86	468 / 472
intestine	100%	2003.00	966 / 966	99%	104.67	522 / 527
brain	99%	2639.25	2623 / 2642	100%	73.87	702 / 705
thymus	100%	4293.88	653 / 653	98%	48.58	595 / 605
stomach	100%	1574.71	359 / 359	98%	93.48	281 / 286
bladder	100%	2350.86	21 / 21	98%	90.15	495 / 504
breast	100%	1972.94	458 / 459	97%	61.02	1085 / 1118
lung	99%	1757.96	574 / 578	97%	67.39	1123 / 1155
liver	99%	1354.84	223 / 226	96%	59.96	388 / 406
adrenal gland	100%	1952.95	258 / 258	94%	38.81	216 / 230
kidney	100%	1605.62	89 / 89	92%	26.76	832 / 901
adipose	100%	1954.86	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	128.59	80 / 80
lymph node	0%	0	0 / 0	100%	147.45	29 / 29
muscle	100%	4888.65	803 / 803	0%	0	0 / 0
spleen	100%	2508.85	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	67.84	45 / 45
ureter	0%	0	0 / 0	100%	117.79	1 / 1
blood vessel	100%	1697.21	1331 / 1335	0%	0	0 / 0
heart	96%	1572.90	829 / 861	0%	0	0 / 0
peripheral blood	86%	1896.12	798 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0000463	Biological process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO_0000448	Biological process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO_0000027	Biological process	ribosomal large subunit assembly
GO_0008283	Biological process	cell population proliferation
GO_0042254	Biological process	ribosome biogenesis
GO_1901796	Biological process	regulation of signal transduction by p53 class mediator
GO_0051726	Biological process	regulation of cell cycle
GO_0030687	Cellular component	preribosome, large subunit precursor
GO_0005730	Cellular component	nucleolus
GO_0005694	Cellular component	chromosome
GO_0005654	Cellular component	nucleoplasm
GO_1990904	Cellular component	ribonucleoprotein complex
GO_0070545	Cellular component	PeBoW complex
GO_0043021	Molecular function	ribonucleoprotein complex binding
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

Gene name	BOP1
Protein name	BOP1 ribosomal biogenesis factor Ribosome biogenesis protein BOP1 (Block of proliferation 1 protein) BOP1 protein
Synonyms	KIAA0124
Description	FUNCTION: Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. . FUNCTION: Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. . FUNCTION: Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. . FUNCTION: Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. .
Accessions	A8K3R2 A0A075B729 Q6DKJ9 ENST00000569669.6 [Q14137-1] Q4G0D9 B2RDN4 ENST00000569403.1 Q14137 B4DEN9

BOP1 report