I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| retinal rod cell | 6 studies | 27% ± 8% | |
| Mueller cell | 5 studies | 25% ± 10% | |
| astrocyte | 5 studies | 23% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| retinal rod cell | 6 studies | 27% ± 8% | |
| Mueller cell | 5 studies | 25% ± 10% | |
| astrocyte | 5 studies | 23% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| eye | 5 studies | 23% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 710.83 | 2640 / 2642 | 100% | 51.47 | 702 / 705 |
| prostate | 99% | 628.40 | 243 / 245 | 99% | 20.54 | 496 / 502 |
| adrenal gland | 100% | 633.33 | 257 / 258 | 70% | 11.03 | 160 / 230 |
| ovary | 84% | 264.47 | 152 / 180 | 83% | 34.89 | 358 / 430 |
| stomach | 98% | 449.15 | 351 / 359 | 39% | 7.10 | 112 / 286 |
| uterus | 96% | 528.26 | 164 / 170 | 38% | 12.52 | 174 / 459 |
| pancreas | 100% | 397.52 | 328 / 328 | 21% | 4.88 | 37 / 178 |
| intestine | 79% | 190.24 | 759 / 966 | 28% | 4.22 | 148 / 527 |
| ureter | 0% | 0 | 0 / 0 | 100% | 10.73 | 1 / 1 |
| heart | 95% | 268.43 | 821 / 861 | 0% | 0 | 0 / 0 |
| breast | 54% | 126.27 | 246 / 459 | 38% | 6.39 | 420 / 1118 |
| eye | 0% | 0 | 0 / 0 | 80% | 10.30 | 64 / 80 |
| lung | 34% | 47.72 | 199 / 578 | 38% | 7.67 | 440 / 1155 |
| thymus | 52% | 69.88 | 337 / 653 | 17% | 1.98 | 101 / 605 |
| bladder | 33% | 42.52 | 7 / 21 | 34% | 5.84 | 173 / 504 |
| kidney | 58% | 78.88 | 52 / 89 | 4% | 0.36 | 35 / 901 |
| esophagus | 13% | 17.70 | 188 / 1445 | 42% | 8.51 | 76 / 183 |
| skin | 23% | 46.58 | 415 / 1809 | 23% | 4.29 | 110 / 472 |
| liver | 4% | 8.02 | 10 / 226 | 33% | 6.36 | 132 / 406 |
| adipose | 18% | 26.34 | 216 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 16% | 2.55 | 7 / 45 |
| blood vessel | 1% | 1.82 | 17 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0.88 | 1 / 241 | 0% | 0 | 0 / 0 |
| muscle | 0% | 0.30 | 2 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0.11 | 1 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0009725 | Biological process | response to hormone |
| GO_0007399 | Biological process | nervous system development |
| GO_0007417 | Biological process | central nervous system development |
| GO_0006417 | Biological process | regulation of translation |
| GO_0030855 | Biological process | epithelial cell differentiation |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0008266 | Molecular function | poly(U) RNA binding |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003729 | Molecular function | mRNA binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | MSI1 |
| Protein name | RNA-binding protein Musashi homolog 1 (Musashi-1) Musashi RNA binding protein 1 |
| Synonyms | |
| Description | FUNCTION: RNA binding protein that regulates the expression of target mRNAs at the translation level. Regulates expression of the NOTCH1 antagonist NUMB. Binds RNA containing the sequence 5'-GUUAGUUAGUUAGUU-3' and other sequences containing the pattern 5'-[GA]U(1-3)AGU-3'. May play a role in the proliferation and maintenance of stem cells in the central nervous system (By similarity). . |
| Accessions | O43347 ENST00000257552.7 ENST00000546985.1 H0YHB7 |
