Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 32% ± 12% | |
endothelial cell | 4 studies | 21% ± 5% | |
basal cell | 4 studies | 26% ± 8% | |
ciliated cell | 3 studies | 23% ± 4% | |
erythroblast | 3 studies | 31% ± 9% | |
dendritic cell | 3 studies | 25% ± 1% | |
intestinal crypt stem cell | 3 studies | 19% ± 4% |
Insufficient scRNA-seq data for expression of MRTO4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1668.46 | 180 / 180 | 100% | 56.56 | 430 / 430 |
pancreas | 100% | 1521.16 | 328 / 328 | 100% | 49.91 | 178 / 178 |
skin | 100% | 2693.62 | 1809 / 1809 | 100% | 88.13 | 472 / 472 |
stomach | 100% | 1447.81 | 359 / 359 | 100% | 63.67 | 286 / 286 |
uterus | 100% | 1718.54 | 170 / 170 | 100% | 91.65 | 459 / 459 |
esophagus | 100% | 1744.93 | 1444 / 1445 | 100% | 60.12 | 183 / 183 |
intestine | 100% | 1480.57 | 966 / 966 | 100% | 74.80 | 526 / 527 |
brain | 100% | 1713.37 | 2635 / 2642 | 100% | 66.31 | 705 / 705 |
thymus | 100% | 1300.25 | 652 / 653 | 100% | 46.06 | 604 / 605 |
bladder | 100% | 1863.81 | 21 / 21 | 100% | 83.53 | 502 / 504 |
breast | 100% | 2012.86 | 459 / 459 | 100% | 65.77 | 1113 / 1118 |
prostate | 100% | 1607.55 | 245 / 245 | 99% | 60.02 | 499 / 502 |
liver | 100% | 1325.83 | 226 / 226 | 99% | 36.70 | 403 / 406 |
lung | 99% | 1378.92 | 574 / 578 | 100% | 66.80 | 1152 / 1155 |
kidney | 100% | 1195.55 | 89 / 89 | 98% | 36.30 | 886 / 901 |
adrenal gland | 100% | 1982.64 | 258 / 258 | 97% | 30.96 | 223 / 230 |
adipose | 100% | 1973.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 106.14 | 29 / 29 |
spleen | 100% | 1600.94 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 81.62 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 70.76 | 1 / 1 |
blood vessel | 100% | 1205.26 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1509.31 | 801 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 59.02 | 79 / 80 |
heart | 96% | 982.03 | 825 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 67% | 1222.89 | 619 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_0000956 | Biological process | nuclear-transcribed mRNA catabolic process |
GO_0006364 | Biological process | rRNA processing |
GO_0030687 | Cellular component | preribosome, large subunit precursor |
GO_0005730 | Cellular component | nucleolus |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | MRTO4 |
Protein name | mRNA turnover protein 4 homolog (Ribosome assembly factor MRTO4) |
Synonyms | MRT4 C1orf33 |
Description | FUNCTION: Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. . |
Accessions | Q9UKD2 ENST00000330263.5 |