H1-5 | OmnibusX

Name	Number of supported studies	Average coverage
plasmablast	5 studies	36% ± 15%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	26% ± 10%	Explore
CD4-positive, alpha-beta T cell	4 studies	29% ± 2%	Explore
hematopoietic precursor cell	3 studies	21% ± 3%	Explore
plasma cell	3 studies	25% ± 3%	Explore
erythrocyte	3 studies	34% ± 11%	Explore
natural killer cell	3 studies	25% ± 11%	Explore
CD8-positive, alpha-beta T cell	3 studies	26% ± 2%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of H1-5 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	53%	9.51	511 / 966	41%	11.45	218 / 527
stomach	42%	3.52	150 / 359	50%	9.81	144 / 286
esophagus	33%	1.61	484 / 1445	57%	1.67	105 / 183
ovary	16%	0.51	28 / 180	73%	4.92	314 / 430
lung	55%	4.35	320 / 578	31%	5.86	359 / 1155
peripheral blood	77%	18.10	716 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	72%	4.79	21 / 29
spleen	72%	11.98	174 / 241	0%	0	0 / 0
breast	51%	3.22	234 / 459	19%	4.64	217 / 1118
uterus	17%	0.40	29 / 170	49%	2.42	224 / 459
skin	54%	4.03	971 / 1809	12%	0.21	57 / 472
bladder	19%	0.90	4 / 21	34%	30.33	171 / 504
adipose	46%	2.75	551 / 1204	0%	0	0 / 0
thymus	34%	1.67	222 / 653	11%	0.84	67 / 605
tonsil	0%	0	0 / 0	44%	1.14	20 / 45
brain	21%	0.84	548 / 2642	10%	0.92	69 / 705
blood vessel	28%	1.13	368 / 1335	0%	0	0 / 0
liver	21%	0.69	47 / 226	5%	0.13	22 / 406
adrenal gland	22%	0.81	58 / 258	3%	0.08	8 / 230
pancreas	13%	0.38	43 / 328	12%	1.42	22 / 178
prostate	18%	0.56	43 / 245	5%	0.13	26 / 502
heart	23%	0.72	195 / 861	0%	0	0 / 0
muscle	16%	0.44	128 / 803	0%	0	0 / 0
kidney	12%	0.47	11 / 89	1%	0.47	12 / 901
eye	0%	0	0 / 0	1%	0.01	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006325	Biological process	chromatin organization
GO_0071169	Biological process	establishment of protein localization to chromatin
GO_0030261	Biological process	chromosome condensation
GO_0000122	Biological process	negative regulation of transcription by RNA polymerase II
GO_0006334	Biological process	nucleosome assembly
GO_0050821	Biological process	protein stabilization
GO_0007517	Biological process	muscle organ development
GO_0045910	Biological process	negative regulation of DNA recombination
GO_0005730	Cellular component	nucleolus
GO_0000786	Cellular component	nucleosome
GO_0000792	Cellular component	heterochromatin
GO_0000791	Cellular component	euchromatin
GO_0005654	Cellular component	nucleoplasm
GO_0005694	Cellular component	chromosome
GO_0000785	Cellular component	chromatin
GO_0005634	Cellular component	nucleus
GO_0003690	Molecular function	double-stranded DNA binding
GO_0031492	Molecular function	nucleosomal DNA binding
GO_0030527	Molecular function	structural constituent of chromatin
GO_0042826	Molecular function	histone deacetylase binding
GO_0003723	Molecular function	RNA binding
GO_0031490	Molecular function	chromatin DNA binding
GO_0005515	Molecular function	protein binding

Gene name	H1-5
Protein name	Histone H1.5 (Histone H1a) (Histone H1b) (Histone H1s-3)
Synonyms	HIST1H1B H1F5
Description	FUNCTION: Histone H1 protein binds to linker DNA between nucleosomes forming the macromolecular structure known as the chromatin fiber. Histones H1 are necessary for the condensation of nucleosome chains into higher-order structured fibers. Acts also as a regulator of individual gene transcription through chromatin remodeling, nucleosome spacing and DNA methylation (By similarity). .
Accessions	ENST00000331442.5 P16401

H1-5 report