Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 21 studies | 42% ± 24% | |
oligodendrocyte | 15 studies | 52% ± 18% | |
oligodendrocyte precursor cell | 14 studies | 58% ± 20% | |
glutamatergic neuron | 11 studies | 67% ± 23% | |
astrocyte | 11 studies | 32% ± 14% | |
GABAergic neuron | 10 studies | 58% ± 23% | |
microglial cell | 10 studies | 34% ± 11% | |
myeloid cell | 10 studies | 38% ± 21% | |
endothelial cell | 8 studies | 35% ± 17% | |
retinal ganglion cell | 7 studies | 68% ± 20% | |
dendritic cell | 7 studies | 33% ± 10% | |
neuron | 6 studies | 48% ± 13% | |
amacrine cell | 6 studies | 37% ± 15% | |
T cell | 6 studies | 23% ± 6% | |
classical monocyte | 5 studies | 21% ± 4% | |
retinal bipolar neuron | 5 studies | 28% ± 10% | |
epithelial cell | 5 studies | 24% ± 9% | |
interneuron | 5 studies | 68% ± 20% | |
B cell | 5 studies | 25% ± 10% | |
monocyte | 5 studies | 37% ± 11% | |
adipocyte | 5 studies | 22% ± 5% | |
mast cell | 5 studies | 29% ± 14% | |
retina horizontal cell | 5 studies | 29% ± 12% | |
regulatory T cell | 5 studies | 24% ± 7% | |
granule cell | 4 studies | 50% ± 7% | |
CD8-positive, alpha-beta T cell | 4 studies | 19% ± 5% | |
cardiac muscle cell | 4 studies | 22% ± 1% | |
OFF-bipolar cell | 4 studies | 43% ± 17% | |
ON-bipolar cell | 4 studies | 47% ± 15% | |
retinal cone cell | 4 studies | 29% ± 12% | |
melanocyte | 4 studies | 54% ± 32% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 61% ± 9% | |
progenitor cell | 3 studies | 23% ± 5% | |
plasma cell | 3 studies | 29% ± 7% | |
CD4-positive, alpha-beta T cell | 3 studies | 24% ± 3% | |
GABAergic amacrine cell | 3 studies | 43% ± 13% | |
glycinergic amacrine cell | 3 studies | 37% ± 4% | |
retinal rod cell | 3 studies | 25% ± 0% | |
rod bipolar cell | 3 studies | 47% ± 14% | |
alveolar macrophage | 3 studies | 47% ± 11% | |
endothelial cell of lymphatic vessel | 3 studies | 21% ± 4% | |
natural killer cell | 3 studies | 22% ± 5% | |
lymphocyte | 3 studies | 38% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 12213.82 | 2636 / 2642 | 100% | 38.18 | 704 / 705 |
skin | 100% | 4335.87 | 1806 / 1809 | 100% | 84.91 | 470 / 472 |
breast | 99% | 2858.61 | 455 / 459 | 95% | 14.21 | 1061 / 1118 |
thymus | 99% | 2277.60 | 645 / 653 | 95% | 10.88 | 573 / 605 |
adrenal gland | 100% | 3060.48 | 257 / 258 | 89% | 18.38 | 204 / 230 |
prostate | 99% | 2154.01 | 242 / 245 | 88% | 9.03 | 444 / 502 |
lung | 98% | 2675.23 | 568 / 578 | 88% | 12.37 | 1014 / 1155 |
esophagus | 93% | 2162.60 | 1344 / 1445 | 85% | 18.13 | 156 / 183 |
kidney | 87% | 1450.44 | 77 / 89 | 86% | 10.62 | 771 / 901 |
uterus | 99% | 2655.12 | 169 / 170 | 70% | 7.66 | 323 / 459 |
bladder | 100% | 2390.71 | 21 / 21 | 60% | 6.15 | 304 / 504 |
pancreas | 63% | 844.27 | 207 / 328 | 85% | 7.83 | 151 / 178 |
ovary | 98% | 2118.06 | 176 / 180 | 50% | 3.29 | 213 / 430 |
intestine | 93% | 2604.36 | 903 / 966 | 30% | 2.76 | 159 / 527 |
stomach | 67% | 1232.14 | 239 / 359 | 48% | 4.10 | 136 / 286 |
adipose | 100% | 4249.14 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2856.46 | 241 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 73.83 | 79 / 80 |
blood vessel | 98% | 2451.17 | 1313 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 14.69 | 27 / 29 |
peripheral blood | 89% | 2926.61 | 829 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 9.46 | 40 / 45 |
muscle | 89% | 1531.07 | 711 / 803 | 0% | 0 | 0 / 0 |
heart | 69% | 1251.43 | 594 / 861 | 0% | 0 | 0 / 0 |
liver | 4% | 55.79 | 10 / 226 | 25% | 1.67 | 101 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0032869 | Biological process | cellular response to insulin stimulus |
GO_0030048 | Biological process | actin filament-based movement |
GO_0006892 | Biological process | post-Golgi vesicle-mediated transport |
GO_0030050 | Biological process | vesicle transport along actin filament |
GO_0032402 | Biological process | melanosome transport |
GO_1903358 | Biological process | regulation of Golgi organization |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0007015 | Biological process | actin filament organization |
GO_0015031 | Biological process | protein transport |
GO_0001726 | Cellular component | ruffle |
GO_0016020 | Cellular component | membrane |
GO_0055037 | Cellular component | recycling endosome |
GO_0005769 | Cellular component | early endosome |
GO_0005764 | Cellular component | lysosome |
GO_0032433 | Cellular component | filopodium tip |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005777 | Cellular component | peroxisome |
GO_0043005 | Cellular component | neuron projection |
GO_0005884 | Cellular component | actin filament |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0032593 | Cellular component | insulin-responsive compartment |
GO_0030426 | Cellular component | growth cone |
GO_0005770 | Cellular component | late endosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0042470 | Cellular component | melanosome |
GO_0031982 | Cellular component | vesicle |
GO_0016459 | Cellular component | myosin complex |
GO_0051015 | Molecular function | actin filament binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0000146 | Molecular function | microfilament motor activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MYO5A |
Protein name | Unconventional myosin-Va (Dilute myosin heavy chain, non-muscle) (Myosin heavy chain 12) (Myosin-12) (Myoxin) Myosin VA Unconventional myosin-Va |
Synonyms | MYH12 |
Description | FUNCTION: Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. Also mediates the transport of vesicles to the plasma membrane. May also be required for some polarization process involved in dendrite formation. . |
Accessions | ENST00000691028.1 A0A8I5KQ70 G3V394 A0A8I5KXS5 ENST00000690775.1 ENST00000685996.1 ENST00000685194.1 ENST00000687968.1 F8WE88 A0A8I5QKR9 ENST00000688841.1 A0A8I5KTF1 A0A8I5QJF6 ENST00000688798.1 A0A8I5KXW9 ENST00000556196.6 ENST00000687574.1 [Q9Y4I1-2] ENST00000685760.1 E7ERV5 ENST00000399228.6 A0A8I5KVK9 A0A8I5KRP9 ENST00000690693.1 ENST00000686171.1 ENST00000399229.7 ENST00000685053.1 ENST00000692708.1 ENST00000693471.1 A0A8I5KRA4 ENST00000689526.1 A0A8I5QKS7 A0A8I5QJA8 ENST00000687728.1 ENST00000399233 H0Y3R0 A0A8I5QJE6 A0A8I5KWE1 ENST00000399233.7 [Q9Y4I1-3] ENST00000692646.1 ENST00000692324.1 G3V3C9 A0A8I5KUG0 A0A8I5KWM1 A0A8I5KYS5 A0A8I5KRL5 A0A8I5KYM3 A0A8I5KV14 ENST00000356338.11 A0A8I5KRS2 A0A8J8YWI7 ENST00000691732.1 ENST00000687748.1 A0A8I5KX10 ENST00000691448.1 Q9Y4I1 A0A8I5KTM5 ENST00000689897.1 ENST00000399231.8 [Q9Y4I1-1] ENST00000688074.1 ENST00000692556.1 A0A8I5KXP8 ENST00000553916.6 |