Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 87% ± 16% | |
lung | 18 studies | 83% ± 14% | |
intestine | 14 studies | 79% ± 24% | |
brain | 14 studies | 37% ± 21% | |
eye | 9 studies | 58% ± 23% | |
kidney | 8 studies | 80% ± 18% | |
liver | 7 studies | 65% ± 27% | |
bone marrow | 6 studies | 86% ± 9% | |
pancreas | 5 studies | 79% ± 17% | |
uterus | 5 studies | 90% ± 12% | |
lymph node | 4 studies | 96% ± 3% | |
placenta | 4 studies | 86% ± 22% | |
heart | 4 studies | 42% ± 21% | |
adipose | 4 studies | 44% ± 30% | |
esophagus | 4 studies | 78% ± 17% | |
prostate | 4 studies | 88% ± 21% | |
breast | 4 studies | 94% ± 4% | |
skin | 3 studies | 84% ± 16% | |
stomach | 3 studies | 59% ± 25% | |
thymus | 3 studies | 85% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 17744.56 | 258 / 258 | 100% | 774.52 | 230 / 230 |
esophagus | 100% | 22393.04 | 1445 / 1445 | 100% | 847.13 | 183 / 183 |
ovary | 100% | 36046.07 | 180 / 180 | 100% | 1610.75 | 430 / 430 |
uterus | 100% | 23055.76 | 170 / 170 | 100% | 1321.57 | 459 / 459 |
skin | 100% | 32654.89 | 1809 / 1809 | 100% | 970.58 | 471 / 472 |
thymus | 100% | 18515.30 | 652 / 653 | 100% | 1090.75 | 604 / 605 |
brain | 100% | 10819.44 | 2629 / 2642 | 100% | 707.27 | 705 / 705 |
pancreas | 100% | 23798.88 | 328 / 328 | 99% | 896.92 | 177 / 178 |
intestine | 100% | 19797.88 | 966 / 966 | 99% | 1256.96 | 524 / 527 |
prostate | 100% | 22443.86 | 245 / 245 | 99% | 1256.68 | 499 / 502 |
stomach | 100% | 15720.43 | 359 / 359 | 99% | 1056.62 | 284 / 286 |
liver | 100% | 11689.00 | 226 / 226 | 99% | 672.61 | 403 / 406 |
bladder | 100% | 21659.48 | 21 / 21 | 99% | 1167.52 | 499 / 504 |
kidney | 100% | 15980.38 | 89 / 89 | 99% | 692.74 | 892 / 901 |
lung | 100% | 16546.66 | 576 / 578 | 99% | 922.18 | 1143 / 1155 |
breast | 100% | 25390.44 | 459 / 459 | 98% | 825.81 | 1101 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 1815.68 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 2505.88 | 29 / 29 |
spleen | 100% | 21555.76 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 1230.59 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1805.27 | 1 / 1 |
blood vessel | 100% | 17336.44 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 23061.64 | 1202 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 19336.28 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 11057.19 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 76% | 14384.03 | 709 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000463 | Biological process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
GO_0006412 | Biological process | translation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0005730 | Cellular component | nucleolus |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0003729 | Molecular function | mRNA binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPL35 |
Protein name | Large ribosomal subunit protein uL29 (60S ribosomal protein L35) |
Synonyms | |
Description | FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . . |
Accessions | ENST00000493018.5 ENST00000348462.6 P42766 ENST00000629845.1 ENST00000373570.8 F2Z388 |